Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   E0E14_RS09830 Genome accession   NZ_LR027877
Coordinates   1944311..1945051 (-) Length   246 a.a.
NCBI ID   WP_000216878.1    Uniprot ID   A0A0H2XJD3
Organism   Staphylococcus aureus isolate BPH3244     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1939311..1950051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0E14_RS09805 hemH 1940187..1941110 (-) 924 WP_000162881.1 ferrochelatase -
  E0E14_RS09810 hemE 1941168..1942205 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  E0E14_RS09815 - 1942195..1942305 (-) 111 WP_001790154.1 hypothetical protein -
  E0E14_RS09820 traP 1942468..1942971 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  E0E14_RS09825 ecsB 1943095..1944318 (-) 1224 WP_001245769.1 ABC transporter permease EcsB -
  E0E14_RS09830 pptA 1944311..1945051 (-) 741 WP_000216878.1 ABC transporter ATP-binding protein EcsA Regulator
  E0E14_RS09835 - 1945185..1945607 (+) 423 WP_000004981.1 HIT family protein -
  E0E14_RS09840 - 1945749..1946114 (+) 366 WP_031879845.1 YtxH domain-containing protein -
  E0E14_RS09850 - 1946847..1947404 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  E0E14_RS09855 - 1947609..1948571 (+) 963 WP_000782121.1 foldase protein PrsA -
  E0E14_RS09860 yhaM 1948692..1949633 (-) 942 WP_001244174.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27717.04 Da        Isoelectric Point: 4.6672

>NTDB_id=993405 E0E14_RS09830 WP_000216878.1 1944311..1945051(-) (pptA) [Staphylococcus aureus isolate BPH3244]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDETMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=993405 E0E14_RS09830 WP_000216878.1 1944311..1945051(-) (pptA) [Staphylococcus aureus isolate BPH3244]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAACGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAGTTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XJD3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment