Detailed information NTG0993408

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AAHT65_RS03520
• Genome accession: NZ_CP154443
• Coordinates: 670780..671943 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SW
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 665780..676943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT65_RS03490 (AAHT65_03490)	-	666031..666450 (-)	420	WP_010790082.1	TIGR03826 family flagellar region protein	-
AAHT65_RS03495 (AAHT65_03495)	comFC	666522..667244 (-)	723	WP_343310985.1	double zinc ribbon domain-containing protein	Machinery gene
AAHT65_RS03500 (AAHT65_03500)	-	667208..667504 (-)	297	WP_010790084.1	late competence development ComFB family protein	-
AAHT65_RS03505 (AAHT65_03505)	comFA	667561..668958 (-)	1398	WP_343310986.1	ATP-dependent helicase ComFA	Machinery gene
AAHT65_RS03510 (AAHT65_03510)	-	669065..669907 (-)	843	WP_003326716.1	DegV family protein	-
AAHT65_RS03515 (AAHT65_03515)	degU	670014..670703 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AAHT65_RS03520 (AAHT65_03520)	degS	670780..671943 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
AAHT65_RS03525 (AAHT65_03525)	-	672161..672814 (+)	654	WP_003326713.1	YigZ family protein	-
AAHT65_RS03530 (AAHT65_03530)	-	672814..674037 (+)	1224	WP_088118072.1	LCP family protein	-
AAHT65_RS03535 (AAHT65_03535)	-	674128..675204 (-)	1077	WP_063638078.1	MraY family glycosyltransferase	-
AAHT65_RS03540 (AAHT65_03540)	-	675345..676535 (-)	1191	WP_277713963.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=993408 AAHT65_RS03520 WP_003326714.1 670780..671943(-) (degS) [Bacillus atrophaeus strain SW]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=993408 AAHT65_RS03520 WP_003326714.1 670780..671943(-) (degS) [Bacillus atrophaeus strain SW]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATCGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAAGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCAGGCTGTTAGGCCTTCAGGAAATTATTGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAAGATTTGCGGCAAGTCGGGTTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTGATGATGAGATCCGAATTAATCGAACGGATCTTTCGCGACCGGG
GAACTGAAGACGGTTTTCAGGAAATTAAAAACCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACGCTGAGAAAATATCTTTATACAACCGAGGAGTA
CAACGGAAAAGTCAAAATACATTTTCAGTGCATTGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
ATCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGACTTGCTTGAGGGGACTATTACAATAGACTCTAAAATAGGTCTTG
GGACATTCATCATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959