Detailed information NTG0992826

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: EC1639_RS20485
• Genome accession: NZ_LR025101
• Coordinates: 4236793..4238025 (+)
• Length: 410 a.a.
• NCBI ID: WP_001161834.1
• Uniprot ID: -
• Organism: Escherichia coli isolate EC-1639
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4231793..4243025

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC1639_RS20470 (EC1639_04077)	-	4232308..4233984 (+)	1677	WP_001323195.1	polysaccharide biosynthesis/export family protein	-
EC1639_RS20475 (EC1639_04078)	kdsB	4233994..4234734 (+)	741	WP_000030749.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EC1639_RS20480 (EC1639_04079)	-	4234731..4236758 (+)	2028	WP_000579512.1	capsular polysaccharide biosynthesis protein	-
EC1639_RS20485 (EC1639_04080)	kpsS	4236793..4238025 (+)	1233	WP_001161834.1	capsular biosynthesis protein	Regulator
EC1639_RS20490	-	4238271..4239380 (+)	1110	Protein_3954	IS3 family transposase	-
EC1639_RS20495 (EC1639_04082)	-	4239598..4241175 (-)	1578	WP_000600936.1	hypothetical protein	-
EC1639_RS20500 (EC1639_04083)	-	4241172..4241543 (-)	372	WP_001309753.1	capsular polysaccharide biosynthesis protein	-
EC1639_RS20505 (EC1639_04084)	-	4241524..4242270 (-)	747	WP_000497656.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 48905.37 Da
• Isoelectric Point: 10.0344

>NTDB_id=992826 EC1639_RS20485 WP_001161834.1 4236793..4238025(+) (kpsS) [Escherichia coli isolate EC-1639]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWHEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDIKLFKKFRGYLLVKTQVNWVYYSNSNLCAYNSK
WAHVNLMDYN

Nucleotide

• Length: 1233 bp

>NTDB_id=992826 EC1639_RS20485 WP_001161834.1 4236793..4238025(+) (kpsS) [Escherichia coli isolate EC-1639]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGATGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCCTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGCATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAATGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGCGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGATTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATAAAACTGTTTAAGAAGT
TTCGCGGGTATTTATTGGTTAAGACGCAGGTTAATTGGGTTTATTATTCCAATAGTAATCTATGTGCATATAATAGTAAG
TGGGCTCATGTTAATTTAATGGATTATAATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.898	95.366	0.38