Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AAIA70_RS14735 | Genome accession | NZ_CP154264 |
| Coordinates | 3186072..3186665 (-) | Length | 197 a.a. |
| NCBI ID | WP_005451500.1 | Uniprot ID | A0A9X3S2A2 |
| Organism | Vibrio harveyi strain 45T2 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3181072..3191665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAIA70_RS14715 (AAIA70_14715) | aroB | 3181941..3183041 (-) | 1101 | WP_038898114.1 | 3-dehydroquinate synthase | - |
| AAIA70_RS14720 (AAIA70_14720) | aroK | 3183073..3183591 (-) | 519 | WP_005451507.1 | shikimate kinase AroK | - |
| AAIA70_RS14725 (AAIA70_14725) | pilQ | 3183781..3185532 (-) | 1752 | WP_005451505.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| AAIA70_RS14730 (AAIA70_14730) | pilP | 3185567..3186082 (-) | 516 | WP_005451501.1 | pilus assembly protein PilP | Machinery gene |
| AAIA70_RS14735 (AAIA70_14735) | pilO | 3186072..3186665 (-) | 594 | WP_005451500.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AAIA70_RS14740 (AAIA70_14740) | pilN | 3186658..3187233 (-) | 576 | WP_005451499.1 | PilN domain-containing protein | Machinery gene |
| AAIA70_RS14745 (AAIA70_14745) | pilM | 3187217..3188233 (-) | 1017 | WP_343291032.1 | type IV pilus assembly protein PilM | Machinery gene |
| AAIA70_RS14750 (AAIA70_14750) | - | 3188412..3190982 (+) | 2571 | WP_050937527.1 | PBP1A family penicillin-binding protein | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23020.58 Da Isoelectric Point: 4.8068
>NTDB_id=992804 AAIA70_RS14735 WP_005451500.1 3186072..3186665(-) (pilO) [Vibrio harveyi strain 45T2]
MVNWQDLEMDEIAEWPLVPQIVVILLLVVLIQGLGYWFYLKPEQEQLNNLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKQSEHFLYRLPLDIELTGDFHDIGRFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVKANTYQFKPEVKKDEK
MVNWQDLEMDEIAEWPLVPQIVVILLLVVLIQGLGYWFYLKPEQEQLNNLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKQSEHFLYRLPLDIELTGDFHDIGRFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVKANTYQFKPEVKKDEK
Nucleotide
Download Length: 594 bp
>NTDB_id=992804 AAIA70_RS14735 WP_005451500.1 3186072..3186665(-) (pilO) [Vibrio harveyi strain 45T2]
ATGGTTAATTGGCAAGATCTAGAAATGGATGAGATCGCTGAGTGGCCATTGGTGCCTCAGATAGTAGTGATCTTGTTGTT
AGTTGTGCTGATTCAAGGCCTTGGTTATTGGTTTTATTTAAAGCCAGAGCAAGAACAGCTGAATAACCTTATTCAAGAAG
AACAAACCTTAAAAGTTGCGTTACGGATCAAAGCGAACAAAGTCGCTGCTTTGCCTCAATTGCAATCGCAACTTGATGAG
CTTACTACTCGATACGAATTGCTACTGCAACAACTGCCTGCACAGAAAGAGCTGGCAACCATGTTGGCTTCGGTGAATGA
ACTCGGAATTGATAATAAGTTGACGTTCACCCGAATCGACTGGGGTGATAAGCAATCAGAACACTTCCTTTATCGTTTAC
CGCTCGACATTGAGTTGACAGGGGATTTTCATGATATCGGTCGTTTCTCCCAAGCGATTGCGACGTTGCCACGCATCATC
ACTTTTAAAGACGTGACTTGGCAGCGTGTCAGCCAAGAGAGTGAAACTCTGCACTTTCGTGTGAAAGCAAACACTTACCA
GTTCAAACCAGAGGTGAAGAAAGATGAGAAGTAA
ATGGTTAATTGGCAAGATCTAGAAATGGATGAGATCGCTGAGTGGCCATTGGTGCCTCAGATAGTAGTGATCTTGTTGTT
AGTTGTGCTGATTCAAGGCCTTGGTTATTGGTTTTATTTAAAGCCAGAGCAAGAACAGCTGAATAACCTTATTCAAGAAG
AACAAACCTTAAAAGTTGCGTTACGGATCAAAGCGAACAAAGTCGCTGCTTTGCCTCAATTGCAATCGCAACTTGATGAG
CTTACTACTCGATACGAATTGCTACTGCAACAACTGCCTGCACAGAAAGAGCTGGCAACCATGTTGGCTTCGGTGAATGA
ACTCGGAATTGATAATAAGTTGACGTTCACCCGAATCGACTGGGGTGATAAGCAATCAGAACACTTCCTTTATCGTTTAC
CGCTCGACATTGAGTTGACAGGGGATTTTCATGATATCGGTCGTTTCTCCCAAGCGATTGCGACGTTGCCACGCATCATC
ACTTTTAAAGACGTGACTTGGCAGCGTGTCAGCCAAGAGAGTGAAACTCTGCACTTTCGTGTGAAAGCAAACACTTACCA
GTTCAAACCAGAGGTGAAGAAAGATGAGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
93.158 |
96.447 |
0.898 |
| pilO | Vibrio cholerae strain A1552 |
71.066 |
100 |
0.711 |