Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | AAIA70_RS14525 | Genome accession | NZ_CP154264 |
| Coordinates | 3134773..3135417 (+) | Length | 214 a.a. |
| NCBI ID | WP_050906941.1 | Uniprot ID | A0A8B3DJF2 |
| Organism | Vibrio harveyi strain 45T2 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3129773..3140417
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAIA70_RS14510 (AAIA70_14510) | - | 3130218..3131666 (-) | 1449 | WP_005444325.1 | MSHA biogenesis protein MshI | - |
| AAIA70_RS14515 (AAIA70_14515) | csrD | 3131678..3133687 (-) | 2010 | WP_009698823.1 | RNase E specificity factor CsrD | - |
| AAIA70_RS14520 (AAIA70_14520) | ssb | 3133939..3134478 (-) | 540 | WP_005444320.1 | single-stranded DNA-binding protein | Machinery gene |
| AAIA70_RS14525 (AAIA70_14525) | qstR | 3134773..3135417 (+) | 645 | WP_050906941.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| AAIA70_RS14530 (AAIA70_14530) | galU | 3135579..3136451 (+) | 873 | WP_005444317.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AAIA70_RS14535 (AAIA70_14535) | uvrA | 3136589..3139411 (+) | 2823 | WP_029789689.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24561.40 Da Isoelectric Point: 8.7703
>NTDB_id=992801 AAIA70_RS14525 WP_050906941.1 3134773..3135417(+) (qstR) [Vibrio harveyi strain 45T2]
MKKSAYARKLFLISMEDDAEKKVEALVKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKALVQSIKNLPLIWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYQEDSLEQVGEGLREIVNGQNWLPRNVTSQLLHYYRNVLSTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
MKKSAYARKLFLISMEDDAEKKVEALVKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKALVQSIKNLPLIWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYQEDSLEQVGEGLREIVNGQNWLPRNVTSQLLHYYRNVLSTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
Nucleotide
Download Length: 645 bp
>NTDB_id=992801 AAIA70_RS14525 WP_050906941.1 3134773..3135417(+) (qstR) [Vibrio harveyi strain 45T2]
GTGAAAAAATCAGCTTATGCGAGAAAATTGTTTTTGATCAGTATGGAAGACGACGCAGAGAAAAAAGTCGAAGCGCTCGT
GAAATACACTGATATTGATATCCCTGTCATCTCCACACAAGCACTGATGGAAGCCAATCCAAAGCATCGCAATAAAATCC
TGTTGATTGACTTTAGTGAACATAAAGCACTCGTACAATCGATCAAAAACTTGCCTTTAATTTGGAAGAATTTTGAAACG
GTCATATTCAATGTTCCTAAACGCTTAACCACCGATGAGTTGTTGTCTTTTGGGCAACTAAAAGGCGTATTTTATCAGGA
AGACTCTCTAGAGCAGGTAGGTGAAGGCTTGAGAGAAATCGTGAATGGCCAAAACTGGTTGCCAAGAAATGTCACTAGTC
AATTGCTTCACTATTATCGCAATGTCCTCAGCACGCACACCGCCCCAGCAACCGTGGACTTAACCATCCGTGAGTTGCAA
GTTTTACGTTGTCTTCAGGCAGGAGCATCTAACAATCAAATGGCAGAAGAATTGTTCGTCAGTGAATTCACCATTAAATC
TCACCTTTATCAGATATTCAAAAAGCTCTCCGTAAAGAATCGCGTTCAAGCTATCGCTTGGGCAGACCAAAACTTGTTGT
CATAA
GTGAAAAAATCAGCTTATGCGAGAAAATTGTTTTTGATCAGTATGGAAGACGACGCAGAGAAAAAAGTCGAAGCGCTCGT
GAAATACACTGATATTGATATCCCTGTCATCTCCACACAAGCACTGATGGAAGCCAATCCAAAGCATCGCAATAAAATCC
TGTTGATTGACTTTAGTGAACATAAAGCACTCGTACAATCGATCAAAAACTTGCCTTTAATTTGGAAGAATTTTGAAACG
GTCATATTCAATGTTCCTAAACGCTTAACCACCGATGAGTTGTTGTCTTTTGGGCAACTAAAAGGCGTATTTTATCAGGA
AGACTCTCTAGAGCAGGTAGGTGAAGGCTTGAGAGAAATCGTGAATGGCCAAAACTGGTTGCCAAGAAATGTCACTAGTC
AATTGCTTCACTATTATCGCAATGTCCTCAGCACGCACACCGCCCCAGCAACCGTGGACTTAACCATCCGTGAGTTGCAA
GTTTTACGTTGTCTTCAGGCAGGAGCATCTAACAATCAAATGGCAGAAGAATTGTTCGTCAGTGAATTCACCATTAAATC
TCACCTTTATCAGATATTCAAAAAGCTCTCCGTAAAGAATCGCGTTCAAGCTATCGCTTGGGCAGACCAAAACTTGTTGT
CATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
92.991 |
100 |
0.93 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
88.785 |
100 |
0.888 |
| qstR | Vibrio cholerae strain A1552 |
52.336 |
100 |
0.523 |