Detailed information NTG0991729

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAHZ20_RS21405
• Genome accession: NZ_CP153688
• Coordinates: 4337881..4338681 (+)
• Length: 266 a.a.
• NCBI ID: WP_002888947.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn2513
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4332881..4343681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHZ20_RS21370 (AAHZ20_21320)	gspH	4333037..4333552 (+)	516	WP_004213437.1	type II secretion system minor pseudopilin GspH	-
AAHZ20_RS21375 (AAHZ20_21325)	gspI	4333549..4333914 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
AAHZ20_RS21380 (AAHZ20_21330)	gspJ	4333911..4334507 (+)	597	WP_004222700.1	type II secretion system minor pseudopilin GspJ	-
AAHZ20_RS21385 (AAHZ20_21335)	gspK	4334504..4335490 (+)	987	WP_004222697.1	type II secretion system minor pseudopilin GspK	-
AAHZ20_RS21390 (AAHZ20_21340)	gspL	4335477..4336670 (+)	1194	WP_004191957.1	type II secretion system protein GspL	-
AAHZ20_RS21395 (AAHZ20_21345)	-	4336663..4337148 (+)	486	WP_004151943.1	type II secretion system protein M	-
AAHZ20_RS21400 (AAHZ20_21350)	-	4337138..4337884 (+)	747	WP_004145897.1	type II secretion system protein N	-
AAHZ20_RS21405 (AAHZ20_21355)	pilD	4337881..4338681 (+)	801	WP_002888947.1	A24 family peptidase	Machinery gene
AAHZ20_RS21410 (AAHZ20_21360)	hrpB	4338729..4341158 (-)	2430	WP_029602503.1	ATP-dependent helicase HrpB	-
AAHZ20_RS21415 (AAHZ20_21365)	thpR	4341231..4341767 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
AAHZ20_RS21420 (AAHZ20_21370)	sfsA	4341767..4342483 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAHZ20_RS21425 (AAHZ20_21375)	dksA	4342646..4343101 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29419.04 Da
• Isoelectric Point: 8.8894

>NTDB_id=991729 AAHZ20_RS21405 WP_002888947.1 4337881..4338681(+) (pilD) [Klebsiella pneumoniae strain Kpn2513]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGSIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=991729 AAHZ20_RS21405 WP_002888947.1 4337881..4338681(+) (pilD) [Klebsiella pneumoniae strain Kpn2513]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTGCTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGAGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425