Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AAHH94_RS20715 | Genome accession | NZ_CP152488 |
| Coordinates | 4418956..4419486 (-) | Length | 176 a.a. |
| NCBI ID | WP_032615999.1 | Uniprot ID | A0A3E1ZQY9 |
| Organism | Leclercia adecarboxylata strain WWCOL-134 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4413956..4424486
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHH94_RS20695 (AAHH94_20695) | soxS | 4414390..4414716 (+) | 327 | WP_032616007.1 | superoxide response transcriptional regulator SoxS | - |
| AAHH94_RS20700 (AAHH94_20700) | - | 4414713..4416299 (-) | 1587 | WP_032616005.1 | EAL domain-containing protein | - |
| AAHH94_RS20705 (AAHH94_20705) | - | 4416638..4417966 (-) | 1329 | WP_223263968.1 | sensor domain-containing diguanylate cyclase | - |
| AAHH94_RS20710 (AAHH94_20710) | - | 4418577..4418858 (+) | 282 | WP_032616001.1 | YjcB family protein | - |
| AAHH94_RS20715 (AAHH94_20715) | ssb | 4418956..4419486 (-) | 531 | WP_032615999.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| AAHH94_RS20720 (AAHH94_20720) | uvrA | 4419737..4422562 (+) | 2826 | WP_032615997.1 | excinuclease ABC subunit UvrA | - |
| AAHH94_RS20725 (AAHH94_20725) | - | 4422563..4422916 (-) | 354 | WP_032615995.1 | MmcQ/YjbR family DNA-binding protein | - |
| AAHH94_RS20730 (AAHH94_20730) | - | 4422919..4423335 (-) | 417 | WP_032615993.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| AAHH94_RS20735 (AAHH94_20735) | aphA | 4423447..4424160 (-) | 714 | WP_032615991.1 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18849.87 Da Isoelectric Point: 5.2456
>NTDB_id=989690 AAHH94_RS20715 WP_032615999.1 4418956..4419486(-) (ssb) [Leclercia adecarboxylata strain WWCOL-134]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=989690 AAHH94_RS20715 WP_032615999.1 4418956..4419486(-) (ssb) [Leclercia adecarboxylata strain WWCOL-134]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGCCGTCTGCACCA
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGCCGTCTGCACCA
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.243 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.684 |
100 |
0.602 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |