Detailed information NTG0098863

Bioinformatically predicted

Overview

• Name: comE
• Type: Regulator
• Locus tag: R8568_RS10750
• Genome accession: NZ_AP026931
• Coordinates: 2101606..2102358 (-)
• Length: 250 a.a.
• NCBI ID: WP_000866065.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701541
• Function: activate transcription of early competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 2096606..2107358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8568_RS10730	-	2099039..2100642 (-)	1604	Protein_2077	YhgE/Pip family protein	-
R8568_RS10735 (PC1520_20790)	-	2100821..2101363 (+)	543	WP_001158266.1	TetR/AcrR family transcriptional regulator	-
R8568_RS10750 (PC1520_20800)	comE	2101606..2102358 (-)	753	WP_000866065.1	competence system response regulator transcription factor ComE	Regulator
R8568_RS10755 (PC1520_20810)	comD/comD1	2102355..2103680 (-)	1326	WP_001850878.1	competence system sensor histidine kinase ComD	Regulator
R8568_RS10760 (PC1520_20820)	comC/comC1	2103701..2103826 (-)	126	WP_000799689.1	competence-stimulating peptide ComC	Regulator
R8568_RS10770 (PC1520_20830)	rlmH	2104108..2104587 (-)	480	WP_000695929.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	-
R8568_RS10775 (PC1520_20840)	htrA	2104770..2105951 (+)	1182	WP_000681601.1	S1C family serine protease	Regulator
R8568_RS10780 (PC1520_20850)	spo0J	2106009..2106767 (+)	759	WP_000410378.1	ParB/RepB/Spo0J family partition protein	Regulator

Sequence

Protein

• Length: 250 a.a.
• Molecular weight: 29958.31 Da
• Isoelectric Point: 6.5073

>NTDB_id=98863 R8568_RS10750 WP_000866065.1 2101606..2102358(-) (comE) [Streptococcus pneumoniae strain PZ900701541]
MKVLILEDVIEHQVRLERILDEISKESNIPISYKTTGKVREFEEYIENDEVNQLYFLDIDIHGIEKKGFEVAQLIRHYNP
YAIIVFITSRSEFATLTYKYQVSALDFVDKDINDEMFKKRIEQNIFYTKSMLLENEDVVDYFDYNYKGNDLKIPYHDILY
IETTGVSHKLRIIGKNFAKEFYGTMTDIQEKDKHTQRFYSPHKSFLVNIGNIREIDRKNLEIVFYEDHRCPISRLKIRKL
KDILEKKSQK

Nucleotide

• Length: 753 bp

>NTDB_id=98863 R8568_RS10750 WP_000866065.1 2101606..2102358(-) (comE) [Streptococcus pneumoniae strain PZ900701541]
ATGAAAGTTTTAATTTTAGAAGATGTTATTGAACATCAAGTGAGACTAGAGAGAATATTGGATGAAATTTCGAAAGAATC
GAATATTCCAATATCATACAAGACAACGGGAAAAGTCCGTGAATTTGAAGAATACATTGAAAATGATGAAGTAAATCAGC
TTTATTTCCTAGATATCGATATTCATGGAATTGAGAAAAAGGGATTTGAAGTGGCTCAGCTCATTCGTCATTACAATCCT
TACGCTATTATCGTCTTTATCACTAGTCGATCAGAGTTTGCGACTCTAACCTATAAATACCAGGTATCAGCCCTAGATTT
TGTTGATAAGGATATCAATGATGAGATGTTTAAGAAGAGAATTGAGCAAAATATCTTCTACACGAAGAGTATGTTACTTG
AAAATGAAGATGTTGTAGATTATTTCGACTACAATTACAAGGGAAATGATTTAAAAATTCCTTACCATGATATTTTGTAT
ATTGAAACAACAGGGGTCTCTCATAAATTGCGCATTATTGGTAAGAATTTTGCAAAAGAGTTTTATGGTACCATGACAGA
TATTCAGGAAAAGGACAAACATACTCAGCGATTTTATTCTCCTCACAAGTCATTTTTGGTAAATATAGGCAATATCAGAG
AAATTGATCGAAAAAACTTAGAAATTGTTTTCTATGAAGACCATCGTTGTCCTATTTCAAGATTAAAAATTAGAAAATTA
AAAGATATTTTAGAGAAAAAATCTCAAAAGTGA

Domains

Predicted by InterproScan.

• LytTr DNA-binding domain (LytTR) (151-244)

• Response regulator receiver domain (Response_reg) (3-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Streptococcus pneumoniae Rx1	100	100	1
comE	Streptococcus pneumoniae D39	100	100	1
comE	Streptococcus pneumoniae R6	100	100	1
comE	Streptococcus pneumoniae TIGR4	100	100	1
comE	Streptococcus mitis SK321	99.2	100	0.992
comE	Streptococcus mitis NCTC 12261	98.4	100	0.984
comE	Streptococcus infantis strain Atu-4	91.2	100	0.912
comE/comE2	Streptococcus gordonii strain NCTC7865	62.8	100	0.628
comE/comE1	Streptococcus gordonii str. Challis substr. CH1	62.8	100	0.628
comE/blpR	Streptococcus mutans UA159	41.296	98.8	0.408