Detailed information NTG0098815

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: R8568_RS06105
• Genome accession: NZ_AP026931
• Coordinates: 1215960..1216913 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495912.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701541
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1210960..1221913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8568_RS06080	-	1211448..1211543 (-)	96	Protein_1206	IS630 family transposase	-
R8568_RS06085 (PC1520_12090)	-	1211956..1212297 (+)	342	Protein_1207	transposase	-
R8568_RS06090 (PC1520_12100)	prsA	1212416..1213357 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
R8568_RS06095 (PC1520_12110)	-	1213424..1214137 (-)	714	WP_001812425.1	O-methyltransferase	-
R8568_RS06100 (PC1520_12130)	pepF	1214139..1215941 (-)	1803	Protein_1210	oligoendopeptidase F	-
R8568_RS06105 (PC1520_12140)	coiA	1215960..1216913 (-)	954	WP_000495912.1	competence protein CoiA	Machinery gene
R8568_RS06110 (PC1520_12150)	tehB	1216986..1217846 (-)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
R8568_RS06115 (PC1520_12160)	smpB	1217862..1218329 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
R8568_RS06120 (PC1520_12170)	rnr	1218292..1220646 (-)	2355	WP_000654919.1	ribonuclease R	-
R8568_RS06125 (PC1520_12180)	secG	1220748..1220981 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
R8568_RS06130	rpmG	1221021..1221170 (-)	150	WP_001810029.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38271.96 Da
• Isoelectric Point: 9.1135

>NTDB_id=98815 R8568_RS06105 WP_000495912.1 1215960..1216913(-) (coiA) [Streptococcus pneumoniae strain PZ900701541]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLVNKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYKVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=98815 R8568_RS06105 WP_000495912.1 1215960..1216913(-) (coiA) [Streptococcus pneumoniae strain PZ900701541]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGTCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACAAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTGTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGGCTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCATTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.901	100	0.438