Detailed information NTG0987341

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: AAF758_RS00780
• Genome accession: NZ_CP152119
• Coordinates: 122551..122985 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ss2301
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117551..127985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAF758_RS00745 (AAF758_00745)	-	118300..118665 (+)	366	WP_002936568.1	DUF1033 family protein	-
AAF758_RS00750 (AAF758_00750)	-	118700..119643 (-)	944	Protein_113	S66 peptidase family protein	-
AAF758_RS00755 (AAF758_00755)	comYA	119729..120679 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
AAF758_RS00760 (AAF758_00760)	comYB	120591..121628 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAF758_RS00765 (AAF758_00765)	comYC	121630..121911 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
AAF758_RS00770 (AAF758_00770)	comGD	121892..122299 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
AAF758_RS00775 (AAF758_00775)	comYE	122271..122564 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAF758_RS00780 (AAF758_00780)	comGF/cglF	122551..122985 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAF758_RS00785 (AAF758_00785)	comGG	122963..123373 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
AAF758_RS00790 (AAF758_00790)	comYH	123430..124383 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
AAF758_RS00795 (AAF758_00795)	-	124433..125620 (+)	1188	WP_012775422.1	acetate kinase	-
AAF758_RS00800 (AAF758_00800)	-	125935..126486 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
AAF758_RS00805 (AAF758_00805)	-	126542..127798 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=987341 AAF758_RS00780 WP_011922561.1 122551..122985(+) (comGF/cglF) [Streptococcus suis strain Ss2301]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=987341 AAF758_RS00780 WP_011922561.1 122551..122985(+) (comGF/cglF) [Streptococcus suis strain Ss2301]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444