Detailed information
Bioinformatically predicted
Overview
| Name | comYE | Type | Machinery gene |
| Locus tag | AAF758_RS00775 | Genome accession | NZ_CP152119 |
| Coordinates | 122271..122564 (+) | Length | 97 a.a. |
| NCBI ID | WP_011921722.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain Ss2301 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 117271..127564
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAF758_RS00745 (AAF758_00745) | - | 118300..118665 (+) | 366 | WP_002936568.1 | DUF1033 family protein | - |
| AAF758_RS00750 (AAF758_00750) | - | 118700..119643 (-) | 944 | Protein_113 | S66 peptidase family protein | - |
| AAF758_RS00755 (AAF758_00755) | comYA | 119729..120679 (+) | 951 | WP_011921718.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AAF758_RS00760 (AAF758_00760) | comYB | 120591..121628 (+) | 1038 | WP_011921719.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AAF758_RS00765 (AAF758_00765) | comYC | 121630..121911 (+) | 282 | WP_011921720.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AAF758_RS00770 (AAF758_00770) | comGD | 121892..122299 (+) | 408 | WP_011921721.1 | competence type IV pilus minor pilin ComGD | - |
| AAF758_RS00775 (AAF758_00775) | comYE | 122271..122564 (+) | 294 | WP_011921722.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AAF758_RS00780 (AAF758_00780) | comGF/cglF | 122551..122985 (+) | 435 | WP_011922561.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AAF758_RS00785 (AAF758_00785) | comGG | 122963..123373 (+) | 411 | WP_011921724.1 | competence type IV pilus minor pilin ComGG | - |
| AAF758_RS00790 (AAF758_00790) | comYH | 123430..124383 (+) | 954 | WP_011922562.1 | class I SAM-dependent methyltransferase | Machinery gene |
| AAF758_RS00795 (AAF758_00795) | - | 124433..125620 (+) | 1188 | WP_012775422.1 | acetate kinase | - |
| AAF758_RS00800 (AAF758_00800) | - | 125935..126486 (+) | 552 | WP_012774908.1 | folate family ECF transporter S component | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10817.70 Da Isoelectric Point: 9.8348
>NTDB_id=987340 AAF758_RS00775 WP_011921722.1 122271..122564(+) (comYE) [Streptococcus suis strain Ss2301]
MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQVWELEQQEVFNLAQMAVQTKQDDLALNGVAVQVQRTAE
RVAVFHEGKEVLSVVKK
MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQVWELEQQEVFNLAQMAVQTKQDDLALNGVAVQVQRTAE
RVAVFHEGKEVLSVVKK
Nucleotide
Download Length: 294 bp
>NTDB_id=987340 AAF758_RS00775 WP_011921722.1 122271..122564(+) (comYE) [Streptococcus suis strain Ss2301]
GTGGTCGCTATAAGAAAACAGAAGAATAAGGCTTATATTTTGCTAGAAAGTCTGGTTGCCCTTGCGACTCTAGTGACCAT
TTGCAGCTTGATTTTATCAGCTGTGGATGCAGGTCGTAGGCGACAGGTTTGGGAATTGGAACAACAGGAGGTTTTCAACT
TAGCACAGATGGCTGTCCAGACAAAACAAGATGACCTAGCCTTAAACGGAGTTGCAGTTCAGGTTCAACGAACTGCGGAA
AGAGTTGCGGTTTTCCATGAAGGAAAGGAGGTTTTATCGGTTGTTAAAAAGTAA
GTGGTCGCTATAAGAAAACAGAAGAATAAGGCTTATATTTTGCTAGAAAGTCTGGTTGCCCTTGCGACTCTAGTGACCAT
TTGCAGCTTGATTTTATCAGCTGTGGATGCAGGTCGTAGGCGACAGGTTTGGGAATTGGAACAACAGGAGGTTTTCAACT
TAGCACAGATGGCTGTCCAGACAAAACAAGATGACCTAGCCTTAAACGGAGTTGCAGTTCAGGTTCAACGAACTGCGGAA
AGAGTTGCGGTTTTCCATGAAGGAAAGGAGGTTTTATCGGTTGTTAAAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYE | Streptococcus mutans UA140 |
51.546 |
100 |
0.515 |
| comYE | Streptococcus mutans UA159 |
51.546 |
100 |
0.515 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
38.043 |
94.845 |
0.361 |
| comGE/cglE | Streptococcus pneumoniae D39 |
38.043 |
94.845 |
0.361 |
| comGE/cglE | Streptococcus pneumoniae R6 |
38.043 |
94.845 |
0.361 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
38.043 |
94.845 |
0.361 |