Detailed information NTG0986448

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHH31_RS16360
• Genome accession: NZ_CP152041
• Coordinates: 3176919..3177605 (-)
• Length: 228 a.a.
• NCBI ID: WP_172793290.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-1033
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3171919..3182605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH31_RS16325 (MHH31_16325)	fliW	3172055..3172489 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
MHH31_RS16330 (MHH31_16330)	-	3172518..3173096 (-)	579	WP_342495007.1	DUF6470 family protein	-
MHH31_RS16335 (MHH31_16335)	flgL	3173143..3174054 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
MHH31_RS16340 (MHH31_16340)	flgK	3174063..3175583 (-)	1521	WP_058336981.1	flagellar hook-associated protein FlgK	-
MHH31_RS16345 (MHH31_16345)	-	3175599..3176081 (-)	483	WP_007499977.1	flagellar protein FlgN	-
MHH31_RS16350 (MHH31_16350)	flgM	3176100..3176363 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHH31_RS16355 (MHH31_16355)	-	3176443..3176862 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
MHH31_RS16360 (MHH31_16360)	comFC	3176919..3177605 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
MHH31_RS16365 (MHH31_16365)	-	3177602..3177895 (-)	294	WP_008348267.1	competence protein ComFB	-
MHH31_RS16370 (MHH31_16370)	comFA	3177960..3179087 (-)	1128	WP_082136017.1	DEAD/DEAH box helicase	Machinery gene
MHH31_RS16375 (MHH31_16375)	-	3179459..3180301 (-)	843	WP_024719242.1	DegV family protein	-
MHH31_RS16380 (MHH31_16380)	degU	3180513..3181202 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHH31_RS16385 (MHH31_16385)	degS	3181267..3182442 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26116.62 Da
• Isoelectric Point: 10.1473

>NTDB_id=986448 MHH31_RS16360 WP_172793290.1 3176919..3177605(-) (comFC) [Bacillus sp. FSL K6-1033]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=986448 MHH31_RS16360 WP_172793290.1 3176919..3177605(-) (comFC) [Bacillus sp. FSL K6-1033]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCTAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGGATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373