Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   NST80_RS02840 Genome accession   NZ_CP152039
Coordinates   555095..556180 (+) Length   361 a.a.
NCBI ID   WP_013990226.1    Uniprot ID   A0A1V0H8X8
Organism   Streptococcus sp. FSL K6-1323     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 550095..561180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS02825 (NST80_02825) amiA 550635..552605 (+) 1971 WP_183138126.1 peptide ABC transporter substrate-binding protein Regulator
  NST80_RS02830 (NST80_02830) amiC 552666..554159 (+) 1494 WP_014632819.1 ABC transporter permease Regulator
  NST80_RS02835 (NST80_02835) amiD 554159..555085 (+) 927 WP_002886846.1 oligopeptide ABC transporter permease OppC Regulator
  NST80_RS02840 (NST80_02840) amiE 555095..556180 (+) 1086 WP_013990226.1 ABC transporter ATP-binding protein Regulator
  NST80_RS02845 (NST80_02845) amiF 556173..557102 (+) 930 WP_014634820.1 ATP-binding cassette domain-containing protein Regulator
  NST80_RS02850 (NST80_02850) - 557152..557937 (-) 786 WP_183138127.1 ABC transporter permease -
  NST80_RS02855 (NST80_02855) - 557949..558647 (-) 699 WP_002884466.1 ABC transporter ATP-binding protein -
  NST80_RS02860 (NST80_02860) - 558652..559029 (-) 378 WP_002884206.1 GntR family transcriptional regulator -
  NST80_RS02865 (NST80_02865) - 559211..560005 (+) 795 WP_013990229.1 HAD family hydrolase -
  NST80_RS02870 (NST80_02870) - 559998..560816 (+) 819 WP_183138128.1 Cof-type HAD-IIB family hydrolase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 40007.70 Da        Isoelectric Point: 4.6135

>NTDB_id=986314 NST80_RS02840 WP_013990226.1 555095..556180(+) (amiE) [Streptococcus sp. FSL K6-1323]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGQDL
TKLKSHQDWAPIRGAKIATIFQDPMTSLDPIKTIGSQIVEVIVKHQGKSAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDKGELFSIPGTPPSLYTPVVGDAFALRSDYAMQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVEKPEVIQNLHEKIRTNMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=986314 NST80_RS02840 WP_013990226.1 555095..556180(+) (amiE) [Streptococcus sp. FSL K6-1323]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
CATTCGAGGAGTTTCCCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGTAAATCAGTTT
TGACTAAGACTTTCACAGGGATGCTTGAAGAAAATGGTCGTGTAGCTAGCGGTTCTATTGATTATCGTGGCCAAGATTTG
ACCAAGCTTAAGAGTCACCAAGATTGGGCGCCTATTCGTGGAGCTAAGATTGCGACTATCTTCCAAGATCCTATGACCAG
TCTTGACCCAATTAAGACTATCGGTAGCCAAATTGTTGAAGTCATTGTCAAGCACCAAGGAAAATCAGCTAAAGAAGCTA
AAAAAATGGCCATTGATTACATGGACAAGGTTGGTATTCCTGATGCTGAAAAACGTTTCAACGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTCATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAGCCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTTTTGAAATCACTCAAAGAGGAGTATGGTTTCTCAGTGA
TTTTCATTACCCATGACCTTGGTGTGGTAGCAAGTATCGCTGACAAGGTTGCTGTTATGTATGCTGGTGAAATCATCGAG
TACGCAACGGTTGAGGAAATTTTCTATGAGCCTTGTCACCCATACACTTGGAGCTTGCTTTCAAGCTTGCCACAGTTGGC
TGACGATAAGGGTGAGCTTTTCTCTATTCCAGGGACACCACCATCACTTTATACACCAGTTGTTGGAGATGCCTTTGCCT
TGCGTTCAGACTATGCCATGCAAATTGACTTCGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCACCAAAAGTTGAAAAACCTGAGGTTATCCAAAATCTACATGAAAAAATCCGTACTAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H8X8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

99.169

100

0.992

  amiE Streptococcus thermophilus LMG 18311

96.399

100

0.964

  amiE Streptococcus thermophilus LMD-9

96.399

100

0.964

  oppD Streptococcus mutans UA159

54.728

96.676

0.529


Multiple sequence alignment