Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   NYE42_RS15775 Genome accession   NZ_CP152036
Coordinates   3185991..3186875 (-) Length   294 a.a.
NCBI ID   WP_061862640.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2865     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3180991..3191875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE42_RS15740 (NYE42_15720) - 3181198..3181674 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  NYE42_RS15745 (NYE42_15725) - 3181674..3181958 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  NYE42_RS15750 (NYE42_15730) mnhG 3181942..3182316 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  NYE42_RS15755 (NYE42_15735) - 3182356..3182739 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  NYE42_RS15760 (NYE42_15740) comA 3182761..3183405 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NYE42_RS15765 (NYE42_15745) comP 3183486..3185795 (-) 2310 WP_352426576.1 histidine kinase Regulator
  NYE42_RS15770 (NYE42_15750) comX 3185815..3185991 (-) 177 WP_007408675.1 competence pheromone ComX -
  NYE42_RS15775 (NYE42_15755) comQ 3185991..3186875 (-) 885 WP_061862640.1 class 1 isoprenoid biosynthesis enzyme Regulator
  NYE42_RS15780 (NYE42_15760) degQ 3187060..3187200 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NYE42_RS15785 (NYE42_15765) - 3187666..3188007 (+) 342 WP_069006914.1 hypothetical protein -
  NYE42_RS15790 (NYE42_15770) - 3188014..3189237 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  NYE42_RS15795 (NYE42_15775) - 3189367..3190833 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -
  NYE42_RS15800 (NYE42_15780) - 3190851..3191402 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 294 a.a.        Molecular weight: 33774.73 Da        Isoelectric Point: 5.9247

>NTDB_id=986158 NYE42_RS15775 WP_061862640.1 3185991..3186875(-) (comQ) [Bacillus sp. FSL K6-2865]
MKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLSADIIDDLEDEDNKQALWM
KIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLEVIRLKCGSLFALSNVAGT
MLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKLVRMFSHRETHLKFISDKN
NFIQTLTDAGVTQYVSVLHQLYKQKCENAIEILNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 885 bp        

>NTDB_id=986158 NYE42_RS15775 WP_061862640.1 3185991..3186875(-) (comQ) [Bacillus sp. FSL K6-2865]
ATGAAGAGTATAATAGAGCAAAACATATTTAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATA
TTTAACCTTTGCTGAATCTGCTTTATTGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGG
CGGGAATTGAAATTCTTACGCTTTCCGCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATG
AAGATAGACCGTTCAGAAGCTTTAAGCGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACAT
GAATCCTTTTATTCTTTCTTACATACTGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGC
CAGAGAAAGAAGATGAAAGTTTAGAGGTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACT
ATGTTAGCAACTGGAAAGTATAATGAAACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGA
TTATCTGGCTCTTTTCAGCTCTAAACGCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGC
TGTTTAACGAGCCTTCTGAAAAATTGGTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAAC
AATTTTATTCAGACATTAACTGATGCAGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGA
AAATGCTATAGAGATACTAAATCTTGAAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAG
TATAA

Domains


Predicted by InterproScan.

(35-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

96.939

0.605


Multiple sequence alignment