Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NYE42_RS15765 Genome accession   NZ_CP152036
Coordinates   3183486..3185795 (-) Length   769 a.a.
NCBI ID   WP_352426576.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2865     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3178486..3190795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE42_RS15725 (NYE42_15705) - 3178946..3179377 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  NYE42_RS15730 (NYE42_15710) - 3179377..3179718 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  NYE42_RS15735 (NYE42_15715) - 3179711..3181192 (+) 1482 WP_042635451.1 Na+/H+ antiporter subunit D -
  NYE42_RS15740 (NYE42_15720) - 3181198..3181674 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  NYE42_RS15745 (NYE42_15725) - 3181674..3181958 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  NYE42_RS15750 (NYE42_15730) mnhG 3181942..3182316 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  NYE42_RS15755 (NYE42_15735) - 3182356..3182739 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  NYE42_RS15760 (NYE42_15740) comA 3182761..3183405 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NYE42_RS15765 (NYE42_15745) comP 3183486..3185795 (-) 2310 WP_352426576.1 histidine kinase Regulator
  NYE42_RS15770 (NYE42_15750) comX 3185815..3185991 (-) 177 WP_007408675.1 competence pheromone ComX -
  NYE42_RS15775 (NYE42_15755) comQ 3185991..3186875 (-) 885 WP_061862640.1 class 1 isoprenoid biosynthesis enzyme Regulator
  NYE42_RS15780 (NYE42_15760) degQ 3187060..3187200 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NYE42_RS15785 (NYE42_15765) - 3187666..3188007 (+) 342 WP_069006914.1 hypothetical protein -
  NYE42_RS15790 (NYE42_15770) - 3188014..3189237 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89162.58 Da        Isoelectric Point: 8.9353

>NTDB_id=986157 NYE42_RS15765 WP_352426576.1 3183486..3185795(-) (comP) [Bacillus sp. FSL K6-2865]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETTYGKFVGLEKGDIILKINKEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIILEFFRKKLPFENIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVAPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTNALQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=986157 NYE42_RS15765 WP_352426576.1 3183486..3185795(-) (comP) [Bacillus sp. FSL K6-2865]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTCATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCATATATAAA
CATAAATGGGATTATAATCGGGACAAAAGTTATTGAAAATAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTA
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGTGACATCATTCTAAAAATCAACAAAGAAAAACCATCTGCTAAATTTTTA
AAAGGAGATAATCTTAGTCATATCAAAAGTTTAGATGTAAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTTTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGGTATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTTCCGATTTTTAATATTATTTTGGAATTTTTCCGTAAGAAATTACCTTTTGAAAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAGTATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGCACCTAATA
TTTTAACTGGTGATTATATATTTCCAGCACTGGCATCAGCCTCATTGCTTGTCCTTATCCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGGTATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAAATGCGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGGTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATC
ATGATAAAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCAT
TAATACACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAGCTGTTTCTGGCAGATTTTAAGAAAGAAGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGCTGCAATCAGGAAAAAGGCGGCGGCCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.357

100

0.756

Multiple sequence alignment