Detailed information NTG0098608

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: R8623_RS09175
• Genome accession: NZ_AP026928
• Coordinates: 1778847..1780013 (-)
• Length: 388 a.a.
• NCBI ID: WP_001085463.1
• Uniprot ID: A0A062WS62
• Organism: Streptococcus pneumoniae strain PZ900700406
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1773847..1785013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8623_RS09145 (PC0401_17750)	-	1774164..1774586 (-)	423	Protein_1788	hypothetical protein	-
R8623_RS09150 (PC0401_17760)	-	1774717..1775073 (-)	357	Protein_1789	ImmA/IrrE family metallo-endopeptidase	-
R8623_RS09155 (PC0401_17770)	-	1775119..1775325 (-)	207	WP_000366093.1	hypothetical protein	-
R8623_RS09160 (PC0401_17780)	-	1775312..1775473 (-)	162	WP_001055999.1	helix-turn-helix domain-containing protein	-
R8623_RS09165 (PC0401_17790)	lytA	1775838..1776794 (-)	957	WP_000405234.1	N-acetylmuramoyl-L-alanine amidase LytA	-
R8623_RS09170 (PC0401_17800)	-	1777170..1778540 (-)	1371	WP_001036270.1	MATE family efflux transporter	-
R8623_RS09175 (PC0401_17810)	recA	1778847..1780013 (-)	1167	WP_001085463.1	recombinase RecA	Machinery gene
R8623_RS09180 (PC0401_17820)	cinA	1780068..1781324 (-)	1257	WP_000642704.1	competence/damage-inducible protein A	Machinery gene
R8623_RS09185 (PC0401_17830)	brpA	1781409..1782425 (-)	1017	WP_054384455.1	biofilm formation/cell division transcriptional regulator BrpA	-
R8623_RS09190 (PC0401_17840)	-	1782433..1782951 (-)	519	WP_000455536.1	GNAT family N-acetyltransferase	-
R8623_RS09195 (PC0401_17850)	tsaE	1782941..1783384 (-)	444	WP_000288230.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
R8623_RS09200 (PC0401_17860)	comM	1783470..1784090 (-)	621	WP_000839909.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 41953.77 Da
• Isoelectric Point: 4.8403

>NTDB_id=98608 R8623_RS09175 WP_001085463.1 1778847..1780013(-) (recA) [Streptococcus pneumoniae strain PZ900700406]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE

Nucleotide

• Length: 1167 bp

>NTDB_id=98608 R8623_RS09175 WP_001085463.1 1778847..1780013(-) (recA) [Streptococcus pneumoniae strain PZ900700406]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTACGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

3D structure

• AlphaFold DB: A0A062WS62

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus pneumoniae Rx1	99.742	100	0.997
recA	Streptococcus pneumoniae D39	99.742	100	0.997
recA	Streptococcus pneumoniae R6	99.742	100	0.997
recA	Streptococcus pneumoniae TIGR4	99.742	100	0.997
recA	Streptococcus mitis NCTC 12261	94.33	100	0.943
recA	Streptococcus mitis SK321	93.814	100	0.938
recA	Streptococcus mutans UA159	83.204	99.742	0.83
recA	Streptococcus pyogenes NZ131	90.725	88.918	0.807
recA	Lactococcus lactis subsp. cremoris KW2	78.409	90.722	0.711
recA	Latilactobacillus sakei subsp. sakei 23K	67.919	89.175	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	68.788	85.052	0.585
recA	Glaesserella parasuis strain SC1401	57.641	96.134	0.554
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.706	83.247	0.539
recA	Neisseria gonorrhoeae MS11	60.177	87.371	0.526
recA	Neisseria gonorrhoeae strain FA1090	60.177	87.371	0.526
recA	Neisseria gonorrhoeae MS11	60.177	87.371	0.526
recA	Vibrio cholerae strain A1552	62.848	83.247	0.523
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.848	83.247	0.523
recA	Acinetobacter baumannii D1279779	61.963	84.021	0.521
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.725	85.309	0.518
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.824	87.629	0.515
recA	Acinetobacter baylyi ADP1	61.35	84.021	0.515
recA	Helicobacter pylori 26695	56.125	90.464	0.508
recA	Helicobacter pylori strain NCTC11637	56.125	90.464	0.508
recA	Pseudomonas stutzeri DSM 10701	59.509	84.021	0.5
recA	Ralstonia pseudosolanacearum GMI1000	59.937	81.701	0.49