Detailed information NTG0985655

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHB66_RS16530
• Genome accession: NZ_CP152027
• Coordinates: 3184670..3185326 (-)
• Length: 218 a.a.
• NCBI ID: WP_235362365.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL L8-0167
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3179670..3190326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHB66_RS16495 (MHB66_16495)	fliW	3179807..3180241 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
MHB66_RS16500 (MHB66_16500)	-	3180270..3180848 (-)	579	WP_024426253.1	DUF6470 family protein	-
MHB66_RS16505 (MHB66_16505)	flgL	3180895..3181803 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
MHB66_RS16510 (MHB66_16510)	flgK	3181813..3183333 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
MHB66_RS16515 (MHB66_16515)	-	3183349..3183831 (-)	483	WP_024423619.1	flagellar protein FlgN	-
MHB66_RS16520 (MHB66_16520)	flgM	3183850..3184113 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHB66_RS16525 (MHB66_16525)	-	3184193..3184612 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
MHB66_RS16530 (MHB66_16530)	comFC	3184670..3185326 (-)	657	WP_235362365.1	ComF family protein	Machinery gene
MHB66_RS16535 (MHB66_16535)	-	3185353..3185646 (-)	294	WP_024423623.1	competence protein ComFB	-
MHB66_RS16540 (MHB66_16540)	comFA	3185695..3187092 (-)	1398	WP_152649307.1	DEAD/DEAH box helicase	Machinery gene
MHB66_RS16545 (MHB66_16545)	-	3187213..3188055 (-)	843	WP_024423625.1	DegV family protein	-
MHB66_RS16550 (MHB66_16550)	degU	3188271..3188960 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHB66_RS16555 (MHB66_16555)	degS	3189025..3190200 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24882.01 Da
• Isoelectric Point: 10.0435

>NTDB_id=985655 MHB66_RS16530 WP_235362365.1 3184670..3185326(-) (comFC) [Bacillus sp. FSL L8-0167]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNSWNERSNSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=985655 MHB66_RS16530 WP_235362365.1 3184670..3185326(-) (comFC) [Bacillus sp. FSL L8-0167]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTAATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362