Detailed information NTG0985657

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: ACN6AT_RS17735
• Genome accession: NZ_CP184255
• Coordinates: 3856286..3858886 (-)
• Length: 866 a.a.
• NCBI ID: WP_420080110.1
• Uniprot ID: -
• Organism: Streptomyces sp. JL4002
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 3851286..3863886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN6AT_RS17710 (ACN6AT_17705)	-	3851813..3852364 (-)	552	WP_420080107.1	DUF2617 family protein	-
ACN6AT_RS17715 (ACN6AT_17710)	-	3852689..3852940 (-)	252	WP_361593591.1	hypothetical protein	-
ACN6AT_RS17720 (ACN6AT_17715)	-	3853067..3854257 (+)	1191	WP_420080108.1	pyridoxal phosphate-dependent aminotransferase	-
ACN6AT_RS17725 (ACN6AT_17720)	-	3854389..3855570 (+)	1182	WP_420080109.1	glycosyltransferase family 39 protein	-
ACN6AT_RS17730 (ACN6AT_17725)	-	3855589..3856128 (-)	540	WP_361593599.1	YbjN domain-containing protein	-
ACN6AT_RS17735 (ACN6AT_17730)	clpE	3856286..3858886 (-)	2601	WP_420080110.1	ATP-dependent chaperone ClpB	Regulator
ACN6AT_RS17740 (ACN6AT_17735)	-	3859023..3859445 (+)	423	WP_361593603.1	pyridoxamine 5'-phosphate oxidase family protein	-
ACN6AT_RS17745 (ACN6AT_17740)	-	3859572..3859886 (-)	315	WP_361593605.1	(2Fe-2S)-binding protein	-
ACN6AT_RS17750 (ACN6AT_17745)	-	3859883..3860158 (-)	276	WP_420080111.1	hypothetical protein	-
ACN6AT_RS17755 (ACN6AT_17750)	-	3860243..3861316 (+)	1074	WP_361593607.1	helix-turn-helix transcriptional regulator	-
ACN6AT_RS17760 (ACN6AT_17755)	-	3861389..3861859 (-)	471	WP_361593609.1	heat shock protein transcriptional repressor HspR	-
ACN6AT_RS17765 (ACN6AT_17760)	dnaJ	3861861..3863039 (-)	1179	WP_420080112.1	molecular chaperone DnaJ	-
ACN6AT_RS17770 (ACN6AT_17765)	grpE	3863079..3863732 (-)	654	WP_361593613.1	nucleotide exchange factor GrpE	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 94160.68 Da
• Isoelectric Point: 4.8175

>NTDB_id=985657 ACN6AT_RS17735 WP_420080110.1 3856286..3858886(-) (clpE) [Streptomyces sp. JL4002]
MDAELTNKSRDALNAATGRAVKDGHADLTPAHLLLALLAGEDNENVVDLLIATDADQAAVRAGAERILAALPSVTGSTVA
PPQPTRELLAVLAEADAEAGKLGDEYLSTEHLLIAIAAKGGAAGEVLSAQGATAKKLLDAFQNARGARRVTTPDPEGQYK
ALEKFGTDFTAAARDGKLDPVIGRDHEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKNKRLVS
LDLGAMVAGAKYRGEFEERLKTVLAEIKSSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVVINDSALVAAATLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPVEIDELQRSVDRLRMEELALKNESDPASRERLEKLRKDLADREEDLRGLTARWEKEKQSLNRVGELKER
LDDLRGQAERAQRDGDFDSASKLLYGEIPALERELAEATEEEAEASKAGSSKDTMVKDEVGPDDIADVVGAWTGIPAGRL
LEGETQKLLRMEDELGRRLIGQTEAVRAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVR
IDMSEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRN
TILILTSNLGSQFLMDPATPAERKKQQVLDVVRASFKPEFLNRLDDLVVFSALSGDELAHIAKLQIGRLARRLADRRLTL
DVTPAALAWLAEQGNDPAYGARPLRRLIQTAIGDRLAKEILSGEVRDGDTVRVDVADGDLLVGKAL

Nucleotide

• Length: 2601 bp

>NTDB_id=985657 ACN6AT_RS17735 WP_420080110.1 3856286..3858886(-) (clpE) [Streptomyces sp. JL4002]
GTGGACGCCGAGCTGACCAACAAGAGCCGGGACGCGCTGAACGCGGCCACCGGCAGGGCCGTGAAGGACGGCCACGCGGA
CCTGACCCCCGCGCACCTGCTGCTGGCCCTGCTCGCCGGCGAGGACAACGAGAACGTCGTCGACCTCCTGATCGCCACGG
ACGCCGACCAGGCCGCCGTCCGGGCCGGCGCCGAGCGCATCCTCGCCGCGCTGCCCAGCGTCACCGGCTCCACGGTCGCG
CCCCCGCAGCCCACCCGCGAGCTGCTCGCCGTACTCGCCGAGGCCGACGCCGAGGCGGGCAAGCTCGGCGACGAGTACCT
GTCCACCGAACACCTCCTCATCGCCATCGCCGCCAAGGGCGGCGCGGCCGGTGAGGTCCTTTCCGCCCAGGGCGCGACGG
CGAAGAAGCTGCTGGACGCCTTCCAGAACGCACGAGGAGCACGGCGGGTGACCACCCCCGACCCCGAGGGCCAGTACAAG
GCCCTGGAGAAGTTCGGCACCGATTTCACGGCCGCCGCGCGCGACGGCAAGCTCGACCCCGTCATCGGCCGCGACCACGA
GATCCGCCGCGTCGTGCAGGTGCTCTCGCGGCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTCGGCAAGA
CCGCCGTCGTCGAGGGGCTCGCCCAGCGCATCGTCAAGGGCGACGTCCCCGAGTCCCTCAAGAACAAGCGGCTGGTCTCC
CTCGACCTCGGCGCGATGGTCGCGGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGACCGTCCTCGCAGAGAT
CAAGTCCAGCGACGGCCAGATCATCACCTTCATCGACGAGCTGCACACGGTCGTCGGCGCGGGCGCCGGCGGCGACTCCG
CCATGGACGCGGGCAACATGCTCAAGCCCATGCTCGCCCGCGGCGAACTGCGCATGGTCGGCGCGACCACCCTCGACGAG
TACCGCGAGCGCATCGAGAAGGACCCGGCGCTGGAGCGGCGCTTCCAGCAGGTGCTGGTCGCCGAGCCCTCCGTCGAGGA
CACCATCGCCATCCTGCGCGGACTCAAGGGCCGCTACGAGGCCCACCACAAGGTCGTCATCAACGACAGCGCGCTGGTGG
CGGCGGCGACCCTCTCCGACCGCTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTCGTCGACGAGGCCGCG
TCCCGGCTCCGCATGGAGATCGACTCCTCGCCCGTCGAGATCGACGAGCTCCAGCGCTCCGTGGACCGGCTGCGCATGGA
GGAGCTCGCGCTCAAGAACGAGTCCGACCCGGCCTCCCGCGAGCGGCTGGAGAAGCTGCGCAAGGACCTCGCCGACCGCG
AGGAGGACCTGCGCGGCCTGACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACCGGGTCGGCGAGCTCAAGGAGCGC
CTGGACGACCTGCGCGGCCAGGCCGAGCGCGCCCAGCGCGACGGCGACTTCGACTCCGCCTCCAAGCTGCTCTACGGGGA
GATCCCGGCCCTGGAGCGCGAGCTCGCCGAGGCCACGGAGGAGGAGGCCGAGGCCTCCAAGGCCGGCAGCTCGAAGGACA
CCATGGTCAAGGACGAGGTCGGACCGGACGACATCGCGGACGTGGTGGGCGCCTGGACCGGCATCCCCGCCGGCCGGCTG
CTGGAGGGCGAGACCCAGAAGCTGCTCCGCATGGAGGACGAGCTGGGCCGCCGCCTGATCGGCCAGACCGAGGCCGTGCG
GGCCGTCTCCGACGCCGTGCGCCGCACCCGCGCCGGCATCGCCGACCCGGACCGGCCGACCGGCTCGTTCCTCTTCCTCG
GCCCGACGGGCGTCGGCAAGACCGAGCTGGCCAAGGCGCTCGCCGACTTCCTCTTCGACGACGAGCGGGCCATGGTCCGC
ATCGACATGTCGGAGTACTCCGAGAAGCACAGCGTGGCCCGGCTCGTCGGCGCCCCGCCCGGCTACGTCGGCTACGAGGA
GGGCGGCCAGCTCACCGAGGCCGTCCGCCGCCGCCCGTACAGCGTGGTGCTCCTGGACGAGGTGGAGAAGGCCCACCCGG
AGGTCTTCGACATCCTGCTCCAGGTCCTCGACGACGGCCGCCTCACGGACGGCCAGGGCCGTACGGTCGACTTCCGCAAC
ACCATCCTCATCCTGACCTCCAACCTGGGCAGCCAGTTCCTGATGGACCCGGCCACCCCCGCCGAACGGAAGAAGCAGCA
GGTCCTGGACGTGGTCCGGGCGAGCTTCAAGCCGGAGTTCCTCAACCGCCTGGACGACCTGGTGGTCTTCTCCGCCCTGA
GCGGGGACGAGCTGGCGCACATCGCCAAGCTGCAGATCGGCCGCCTGGCCCGCCGGCTCGCCGACCGGCGCCTCACCCTG
GACGTCACCCCGGCCGCCCTGGCCTGGCTGGCCGAGCAGGGCAACGACCCGGCGTACGGAGCGCGCCCGCTGCGCCGCCT
GATCCAGACGGCCATCGGGGACCGCCTGGCGAAGGAGATCCTCTCCGGCGAGGTCCGCGACGGGGACACCGTCCGGGTCG
ACGTGGCGGACGGGGACCTGCTGGTCGGCAAGGCCCTCTGA

Domains

Predicted by InterProScan.

• AAA lid domain (AAA_lid_9) (344-446)

• AAA domain (Cdc48 subfamily) (AAA_2) (605-766)

• ATPase family associated with various cellular activities (AAA) (AAA) (204-338)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (773-853)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (19-43)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (95-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus pneumoniae TIGR4	45.599	80.023	0.365