Detailed information NTG0985350

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHI08_RS16180
• Genome accession: NZ_CP152022
• Coordinates: 3134468..3135124 (-)
• Length: 218 a.a.
• NCBI ID: WP_241218534.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M7-0791
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3129468..3140124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI08_RS16145 (MHI08_16145)	fliW	3129606..3130040 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
MHI08_RS16150 (MHI08_16150)	-	3130069..3130647 (-)	579	WP_248351050.1	DUF6470 family protein	-
MHI08_RS16155 (MHI08_16155)	flgL	3130694..3131602 (-)	909	WP_024423617.1	flagellar hook-associated protein FlgL	-
MHI08_RS16160 (MHI08_16160)	flgK	3131612..3133132 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
MHI08_RS16165 (MHI08_16165)	-	3133148..3133630 (-)	483	WP_224426748.1	flagellar protein FlgN	-
MHI08_RS16170 (MHI08_16170)	flgM	3133649..3133912 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHI08_RS16175 (MHI08_16175)	-	3133992..3134411 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
MHI08_RS16180 (MHI08_16180)	comFC	3134468..3135124 (-)	657	WP_241218534.1	ComF family protein	Machinery gene
MHI08_RS16185 (MHI08_16185)	-	3135151..3135444 (-)	294	WP_025093967.1	competence protein ComFB	-
MHI08_RS16190 (MHI08_16190)	comFA	3135493..3136890 (-)	1398	WP_342500201.1	DEAD/DEAH box helicase	Machinery gene
MHI08_RS16195 (MHI08_16195)	-	3137011..3137853 (-)	843	WP_024423625.1	DegV family protein	-
MHI08_RS16200 (MHI08_16200)	degU	3138069..3138758 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHI08_RS16205 (MHI08_16205)	degS	3138823..3139998 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24965.09 Da
• Isoelectric Point: 9.9287

>NTDB_id=985350 MHI08_RS16180 WP_241218534.1 3134468..3135124(-) (comFC) [Bacillus sp. FSL M7-0791]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNRWNERSDSIKILVKNRSVYTYNELMKDVLA
RFKFRGDTALAELFQKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=985350 MHI08_RS16180 WP_241218534.1 3134468..3135124(-) (comFC) [Bacillus sp. FSL M7-0791]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGCCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTGTGCCAGGACTGTAACAGATGGAATG
AACGCTCTGATTCTATTAAAATCCTTGTAAAAAATAGGTCAGTTTATACTTACAACGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTCAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATTCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACAGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362