Detailed information NTG0098503

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: R8611_RS04475
• Genome accession: NZ_AP026927
• Coordinates: 880574..881527 (+)
• Length: 317 a.a.
• NCBI ID: WP_044791175.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700178
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 875574..886527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8611_RS04450	rpmG	876317..876466 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
R8611_RS04455 (PC0174_08730)	secG	876506..876739 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
R8611_RS04460 (PC0174_08740)	rnr	876841..879195 (+)	2355	WP_050199424.1	ribonuclease R	-
R8611_RS04465 (PC0174_08750)	smpB	879158..879625 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
R8611_RS04470 (PC0174_08760)	tehB	879641..880501 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
R8611_RS04475 (PC0174_08770)	coiA	880574..881527 (+)	954	WP_044791175.1	competence protein CoiA	Machinery gene
R8611_RS04480 (PC0174_08780)	pepF	881546..883348 (+)	1803	WP_050199423.1	oligoendopeptidase F	Regulator
R8611_RS04485 (PC0174_08790)	-	883350..884063 (+)	714	WP_078102909.1	O-methyltransferase	-
R8611_RS04490 (PC0174_08800)	prsA	884130..885071 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
R8611_RS04495 (PC0174_08810)	-	885187..885528 (-)	342	Protein_890	transposase	-
R8611_RS04500	-	885944..886039 (+)	96	Protein_891	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38285.94 Da
• Isoelectric Point: 8.9763

>NTDB_id=98503 R8611_RS04475 WP_044791175.1 880574..881527(+) (coiA) [Streptococcus pneumoniae strain PZ900700178]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSLLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=98503 R8611_RS04475 WP_044791175.1 880574..881527(+) (coiA) [Streptococcus pneumoniae strain PZ900700178]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCTCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	89.274	100	0.893
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435