Detailed information NTG0984929

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NYE28_RS18510
• Genome accession: NZ_CP152013
• Coordinates: 3668613..3669776 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus sp. FSL R5-0443
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3663613..3674776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE28_RS18480 (NYE28_18480)	-	3663877..3664296 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
NYE28_RS18485 (NYE28_18485)	comFC	3664370..3665059 (-)	690	WP_342490487.1	double zinc ribbon domain-containing protein	Machinery gene
NYE28_RS18490 (NYE28_18490)	-	3665065..3665349 (-)	285	WP_007407481.1	competence protein ComFB	-
NYE28_RS18495 (NYE28_18495)	comFA	3665407..3666792 (-)	1386	WP_099320008.1	DEAD/DEAH box helicase	Machinery gene
NYE28_RS18500 (NYE28_18500)	-	3666901..3667749 (-)	849	WP_003151387.1	DegV family protein	-
NYE28_RS18505 (NYE28_18505)	degU	3667847..3668536 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NYE28_RS18510 (NYE28_18510)	degS	3668613..3669776 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
NYE28_RS18515 (NYE28_18515)	-	3669999..3670646 (+)	648	WP_061581228.1	YigZ family protein	-
NYE28_RS18520 (NYE28_18520)	-	3670651..3671886 (+)	1236	WP_025285355.1	LCP family protein	-
NYE28_RS18525 (NYE28_18525)	-	3671985..3673061 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
NYE28_RS18530 (NYE28_18530)	-	3673194..3674390 (-)	1197	WP_094032536.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=984929 NYE28_RS18510 WP_007407484.1 3668613..3669776(-) (degS) [Bacillus sp. FSL R5-0443]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=984929 NYE28_RS18510 WP_007407484.1 3668613..3669776(-) (degS) [Bacillus sp. FSL R5-0443]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951