Detailed information NTG0098422

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: R8559_RS04925
• Genome accession: NZ_AP026926
• Coordinates: 942879..943832 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495894.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700119
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 937879..948832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8559_RS04900	rpmG	938622..938771 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
R8559_RS04905 (PC0116_09690)	secG	938811..939044 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
R8559_RS04910 (PC0116_09700)	rnr	939146..941500 (+)	2355	WP_317638995.1	ribonuclease R	-
R8559_RS04915 (PC0116_09710)	smpB	941463..941930 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
R8559_RS04920 (PC0116_09720)	tehB	941946..942806 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
R8559_RS04925 (PC0116_09730)	coiA	942879..943832 (+)	954	WP_000495894.1	competence protein CoiA	Machinery gene
R8559_RS04930 (PC0116_09740)	pepF	943851..945653 (+)	1803	WP_000244131.1	oligoendopeptidase F	Regulator
R8559_RS04935 (PC0116_09750)	-	945655..946368 (+)	714	WP_001812425.1	O-methyltransferase	-
R8559_RS04940 (PC0116_09760)	prsA	946435..947376 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
R8559_RS04945 (PC0116_09770)	-	947495..947824 (-)	330	Protein_978	transposase	-
R8559_RS04950	-	948247..948360 (+)	114	Protein_979	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38248.93 Da
• Isoelectric Point: 9.2255

>NTDB_id=98422 R8559_RS04925 WP_000495894.1 942879..943832(+) (coiA) [Streptococcus pneumoniae strain PZ900700119]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGKKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=98422 R8559_RS04925 WP_000495894.1 942879..943832(+) (coiA) [Streptococcus pneumoniae strain PZ900700119]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTAAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	98.423	100	0.984
coiA	Streptococcus pneumoniae Rx1	97.792	100	0.978
coiA	Streptococcus pneumoniae D39	97.792	100	0.978
coiA	Streptococcus pneumoniae R6	97.792	100	0.978
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435