Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   NST15_RS11415 Genome accession   NZ_CP151991
Coordinates   2224813..2225106 (-) Length   97 a.a.
NCBI ID   WP_057079311.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0820     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2219813..2230106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST15_RS11365 (NST15_11365) sinR 2219984..2220319 (+) 336 WP_017357978.1 helix-turn-helix domain-containing protein Regulator
  NST15_RS11370 (NST15_11370) - 2220387..2221187 (-) 801 WP_035390805.1 TasA family protein -
  NST15_RS11375 (NST15_11375) - 2221246..2221818 (-) 573 WP_017357979.1 signal peptidase I -
  NST15_RS11380 (NST15_11380) tapA 2221868..2222395 (-) 528 WP_050827403.1 amyloid fiber anchoring/assembly protein TapA -
  NST15_RS11385 (NST15_11385) - 2222648..2222974 (+) 327 WP_048001387.1 DUF3889 domain-containing protein -
  NST15_RS11390 (NST15_11390) - 2223008..2223196 (-) 189 WP_017367591.1 YqzE family protein -
  NST15_RS11395 (NST15_11395) comGG 2223257..2223640 (-) 384 WP_058214152.1 competence type IV pilus minor pilin ComGG -
  NST15_RS11400 (NST15_11400) comGF 2223637..2224134 (-) 498 WP_342498540.1 competence type IV pilus minor pilin ComGF -
  NST15_RS11405 (NST15_11405) comGE 2224076..2224390 (-) 315 WP_058214150.1 competence type IV pilus minor pilin ComGE -
  NST15_RS11410 (NST15_11410) comGD 2224374..2224820 (-) 447 WP_057079312.1 competence type IV pilus minor pilin ComGD -
  NST15_RS11415 (NST15_11415) comGC 2224813..2225106 (-) 294 WP_057079311.1 competence type IV pilus major pilin ComGC Machinery gene
  NST15_RS11420 (NST15_11420) comGB 2225123..2226163 (-) 1041 WP_342498541.1 competence type IV pilus assembly protein ComGB -
  NST15_RS11425 (NST15_11425) comGA 2226144..2227214 (-) 1071 WP_224558453.1 competence type IV pilus ATPase ComGA Machinery gene
  NST15_RS11430 (NST15_11430) - 2227671..2228543 (-) 873 WP_046527023.1 STAS domain-containing protein -
  NST15_RS11440 (NST15_11440) - 2228769..2229149 (-) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  NST15_RS11445 (NST15_11445) - 2229362..2229604 (+) 243 WP_003217440.1 DUF2626 domain-containing protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10728.62 Da        Isoelectric Point: 6.7081

>NTDB_id=983866 NST15_RS11415 WP_057079311.1 2224813..2225106(-) (comGC) [Bacillus sp. FSL R5-0820]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQSIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIFLQNGDVKNE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=983866 NST15_RS11415 WP_057079311.1 2224813..2225106(-) (comGC) [Bacillus sp. FSL R5-0820]
ATGAATGATAAAGGATTTACCCTGTTAGAAATGTTAATTGTCATGCTTGTGATCTCCATTCTTTTATTGATTACCATTCC
AAATATCACTCGGCATCATCAAAGCATTCAAGCAAAGGGCTGTGAAGGGCTGAAATCAATGGTGAGTACACAGGTAATGG
CATATGAATTAGAGCATGATGGCAAGACGCCATCTTTAGCTGAATTAGAAAAAGAAGGCTATGTCAAAAAGGGATTAACT
TGTCCGAATGGAAAGGCAATTTTCCTTCAAAACGGGGATGTGAAAAATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

65.979

100

0.66
  comGC Staphylococcus aureus MW2

40.217

94.845

0.381
  comGC Staphylococcus aureus N315

40.217

94.845

0.381

Multiple sequence alignment