Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NST15_RS11365 | Genome accession | NZ_CP151991 |
| Coordinates | 2219984..2220319 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0820 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2214984..2225319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST15_RS11345 (NST15_11345) | gcvT | 2215460..2216557 (-) | 1098 | WP_019743009.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST15_RS11350 (NST15_11350) | - | 2217119..2218789 (+) | 1671 | WP_165378916.1 | SNF2-related protein | - |
| NST15_RS11355 (NST15_11355) | - | 2218804..2219601 (+) | 798 | WP_035702783.1 | YqhG family protein | - |
| NST15_RS11360 (NST15_11360) | - | 2219786..2219950 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| NST15_RS11365 (NST15_11365) | sinR | 2219984..2220319 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| NST15_RS11370 (NST15_11370) | - | 2220387..2221187 (-) | 801 | WP_035390805.1 | TasA family protein | - |
| NST15_RS11375 (NST15_11375) | - | 2221246..2221818 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| NST15_RS11380 (NST15_11380) | tapA | 2221868..2222395 (-) | 528 | WP_050827403.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST15_RS11385 (NST15_11385) | - | 2222648..2222974 (+) | 327 | WP_048001387.1 | DUF3889 domain-containing protein | - |
| NST15_RS11390 (NST15_11390) | - | 2223008..2223196 (-) | 189 | WP_017367591.1 | YqzE family protein | - |
| NST15_RS11395 (NST15_11395) | comGG | 2223257..2223640 (-) | 384 | WP_058214152.1 | competence type IV pilus minor pilin ComGG | - |
| NST15_RS11400 (NST15_11400) | comGF | 2223637..2224134 (-) | 498 | WP_342498540.1 | competence type IV pilus minor pilin ComGF | - |
| NST15_RS11405 (NST15_11405) | comGE | 2224076..2224390 (-) | 315 | WP_058214150.1 | competence type IV pilus minor pilin ComGE | - |
| NST15_RS11410 (NST15_11410) | comGD | 2224374..2224820 (-) | 447 | WP_057079312.1 | competence type IV pilus minor pilin ComGD | - |
| NST15_RS11415 (NST15_11415) | comGC | 2224813..2225106 (-) | 294 | WP_057079311.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=983865 NST15_RS11365 WP_017357978.1 2219984..2220319(+) (sinR) [Bacillus sp. FSL R5-0820]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983865 NST15_RS11365 WP_017357978.1 2219984..2220319(+) (sinR) [Bacillus sp. FSL R5-0820]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |