Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   NSU13_RS11415 Genome accession   NZ_CP151986
Coordinates   2224898..2225191 (-) Length   97 a.a.
NCBI ID   WP_024422977.1    Uniprot ID   A0A0M2EIN6
Organism   Bacillus sp. FSL M8-0049     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2219898..2230191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU13_RS11365 (NSU13_11365) sinR 2220062..2220397 (+) 336 WP_024422969.1 transcriptional regulator SinR Regulator
  NSU13_RS11370 (NSU13_11370) - 2220465..2221265 (-) 801 WP_034280222.1 TasA family protein -
  NSU13_RS11375 (NSU13_11375) - 2221323..2221895 (-) 573 WP_034280218.1 signal peptidase I -
  NSU13_RS11380 (NSU13_11380) tapA 2221948..2222475 (-) 528 WP_120208209.1 amyloid fiber anchoring/assembly protein TapA -
  NSU13_RS11385 (NSU13_11385) - 2222775..2223053 (+) 279 WP_061109527.1 DUF3889 domain-containing protein -
  NSU13_RS11390 (NSU13_11390) - 2223088..2223282 (-) 195 WP_120208337.1 YqzE family protein -
  NSU13_RS11395 (NSU13_11395) comGG 2223342..2223725 (-) 384 WP_211043251.1 competence type IV pilus minor pilin ComGG -
  NSU13_RS11400 (NSU13_11400) comGF 2223722..2224249 (-) 528 WP_342489525.1 competence type IV pilus minor pilin ComGF -
  NSU13_RS11405 (NSU13_11405) comGE 2224161..2224475 (-) 315 WP_264315972.1 competence type IV pilus minor pilin ComGE -
  NSU13_RS11410 (NSU13_11410) comGD 2224459..2224905 (-) 447 WP_342489526.1 competence type IV pilus minor pilin ComGD -
  NSU13_RS11415 (NSU13_11415) comGC 2224898..2225191 (-) 294 WP_024422977.1 competence type IV pilus major pilin ComGC Machinery gene
  NSU13_RS11420 (NSU13_11420) comGB 2225208..2226248 (-) 1041 WP_342489527.1 competence type IV pilus assembly protein ComGB -
  NSU13_RS11425 (NSU13_11425) comGA 2226229..2227299 (-) 1071 WP_041117979.1 competence type IV pilus ATPase ComGA Machinery gene
  NSU13_RS11430 (NSU13_11430) - 2227477..2228352 (-) 876 WP_024422979.1 STAS domain-containing protein -
  NSU13_RS11440 (NSU13_11440) - 2228576..2228956 (-) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  NSU13_RS11445 (NSU13_11445) - 2229169..2229411 (+) 243 WP_003217440.1 DUF2626 domain-containing protein -
  NSU13_RS11450 (NSU13_11450) - 2229458..2230096 (-) 639 WP_034280195.1 MBL fold metallo-hydrolase -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10686.62 Da        Isoelectric Point: 7.3218

>NTDB_id=983559 NSU13_RS11415 WP_024422977.1 2224898..2225191(-) (comGC) [Bacillus sp. FSL M8-0049]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQAIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIVIQNGNVKHE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=983559 NSU13_RS11415 WP_024422977.1 2224898..2225191(-) (comGC) [Bacillus sp. FSL M8-0049]
ATGAATGATAAAGGATTTACCCTGTTAGAAATGTTAATAGTCATGCTTGTAATATCCATTCTTTTACTCATTACCATACC
GAATATTACACGTCATCACCAAGCTATTCAGGCAAAGGGCTGTGAAGGGCTTAAATCAATGGTCAGCACACAAGTGATGG
CATATGAATTGGAGCATGATGGGAAGACGCCATCTTTAGCTGAATTAGAAAAAGAAGGTTATGTCAAAAAAGGATTAACT
TGTCCTAATGGAAAAGCGATTGTCATTCAAAACGGCAACGTGAAGCATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M2EIN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

67.01

100

0.67
  comGC Staphylococcus aureus MW2

42.222

92.784

0.392
  comGC Staphylococcus aureus N315

42.222

92.784

0.392

Multiple sequence alignment