Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NSU13_RS11365 | Genome accession | NZ_CP151986 |
| Coordinates | 2220062..2220397 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0049 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2215062..2225397
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU13_RS11345 (NSU13_11345) | gcvT | 2215538..2216635 (-) | 1098 | WP_342489524.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NSU13_RS11350 (NSU13_11350) | - | 2217198..2218868 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| NSU13_RS11355 (NSU13_11355) | - | 2218883..2219680 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| NSU13_RS11360 (NSU13_11360) | - | 2219864..2220028 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| NSU13_RS11365 (NSU13_11365) | sinR | 2220062..2220397 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| NSU13_RS11370 (NSU13_11370) | - | 2220465..2221265 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| NSU13_RS11375 (NSU13_11375) | - | 2221323..2221895 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| NSU13_RS11380 (NSU13_11380) | tapA | 2221948..2222475 (-) | 528 | WP_120208209.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSU13_RS11385 (NSU13_11385) | - | 2222775..2223053 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| NSU13_RS11390 (NSU13_11390) | - | 2223088..2223282 (-) | 195 | WP_120208337.1 | YqzE family protein | - |
| NSU13_RS11395 (NSU13_11395) | comGG | 2223342..2223725 (-) | 384 | WP_211043251.1 | competence type IV pilus minor pilin ComGG | - |
| NSU13_RS11400 (NSU13_11400) | comGF | 2223722..2224249 (-) | 528 | WP_342489525.1 | competence type IV pilus minor pilin ComGF | - |
| NSU13_RS11405 (NSU13_11405) | comGE | 2224161..2224475 (-) | 315 | WP_264315972.1 | competence type IV pilus minor pilin ComGE | - |
| NSU13_RS11410 (NSU13_11410) | comGD | 2224459..2224905 (-) | 447 | WP_342489526.1 | competence type IV pilus minor pilin ComGD | - |
| NSU13_RS11415 (NSU13_11415) | comGC | 2224898..2225191 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=983558 NSU13_RS11365 WP_024422969.1 2220062..2220397(+) (sinR) [Bacillus sp. FSL M8-0049]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983558 NSU13_RS11365 WP_024422969.1 2220062..2220397(+) (sinR) [Bacillus sp. FSL M8-0049]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |