Detailed information NTG0983392

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NST65_RS16410
• Genome accession: NZ_CP151983
• Coordinates: 3173340..3173996 (-)
• Length: 218 a.a.
• NCBI ID: WP_258521759.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL P4-0248
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3168340..3178996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST65_RS16375 (NST65_16375)	fliW	3168478..3168912 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NST65_RS16380 (NST65_16380)	-	3168941..3169519 (-)	579	WP_081124902.1	DUF6470 family protein	-
NST65_RS16385 (NST65_16385)	flgL	3169566..3170474 (-)	909	WP_081124903.1	flagellar hook-associated protein FlgL	-
NST65_RS16390 (NST65_16390)	flgK	3170484..3172004 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NST65_RS16395 (NST65_16395)	-	3172020..3172502 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NST65_RS16400 (NST65_16400)	flgM	3172521..3172784 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST65_RS16405 (NST65_16405)	-	3172864..3173283 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NST65_RS16410 (NST65_16410)	comFC	3173340..3173996 (-)	657	WP_258521759.1	ComF family protein	Machinery gene
NST65_RS16415 (NST65_16415)	-	3174023..3174316 (-)	294	WP_024423623.1	competence protein ComFB	-
NST65_RS16420 (NST65_16420)	comFA	3174365..3175765 (-)	1401	WP_309300290.1	DEAD/DEAH box helicase	Machinery gene
NST65_RS16425 (NST65_16425)	-	3175883..3176725 (-)	843	WP_024423625.1	DegV family protein	-
NST65_RS16430 (NST65_16430)	degU	3176941..3177630 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST65_RS16435 (NST65_16435)	degS	3177695..3178870 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24968.10 Da
• Isoelectric Point: 10.0431

>NTDB_id=983392 NST65_RS16410 WP_258521759.1 3173340..3173996(-) (comFC) [Bacillus sp. FSL P4-0248]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNRWNERSDSTKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALVELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983392 NST65_RS16410 WP_258521759.1 3173340..3173996(-) (comFC) [Bacillus sp. FSL P4-0248]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACGTGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGATGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGTTGAGCTGTTTAAAAGAGATGTGCAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCAATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362