Detailed information NTG0983353

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACN2WE_RS14495
• Genome accession: NZ_CP183921
• Coordinates: 3070683..3071969 (-)
• Length: 428 a.a.
• NCBI ID: WP_111668326.1
• Uniprot ID: -
• Organism: Streptomyces sp. cg28
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3065683..3076969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN2WE_RS14480 (ACN2WE_14480)	-	3066282..3066818 (+)	537	WP_111668329.1	hypothetical protein	-
ACN2WE_RS14485 (ACN2WE_14485)	-	3066882..3069512 (-)	2631	WP_420033649.1	valine--tRNA ligase	-
ACN2WE_RS14490 (ACN2WE_14490)	-	3069628..3070605 (+)	978	WP_420033650.1	hypothetical protein	-
ACN2WE_RS14495 (ACN2WE_14495)	clpX	3070683..3071969 (-)	1287	WP_111668326.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACN2WE_RS14500 (ACN2WE_14500)	clpP	3072125..3072784 (-)	660	WP_111668325.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACN2WE_RS14505 (ACN2WE_14505)	clpP	3072844..3073449 (-)	606	WP_111668324.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACN2WE_RS14510 (ACN2WE_14510)	tig	3073840..3075207 (-)	1368	WP_420033651.1	trigger factor	-
ACN2WE_RS14525 (ACN2WE_14525)	-	3075822..3076016 (-)	195	WP_111668373.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46737.39 Da
• Isoelectric Point: 4.7856

>NTDB_id=983353 ACN2WE_RS14495 WP_111668326.1 3070683..3071969(-) (clpX) [Streptomyces sp. cg28]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGSSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADAVHSNVNPTLIPRDARGGGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=983353 ACN2WE_RS14495 WP_111668326.1 3070683..3071969(-) (clpX) [Streptomyces sp. cg28]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAAAAGCTCAT
CGCAGGCCCCGGTGTATACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAAGTGCGTTGGGAAGAGCTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTGGGCCAGGAGGCC
GCCAAGAAGGCGCTCTCCGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCAGGGGAGAACGGCGGGGGCAGCAGCCG
TGAGGACGCCATCGAACTGGCGAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCCACGGCGCTCACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTCGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATTCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCTCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCGCACCGGCGCGCGTGGTCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGATGCGCGGGGCGGCGGCAGCGGGGAGCAGAAGTC
GGCTTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521