Detailed information NTG0983217

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: V3C22_RS00360
• Genome accession: NZ_CP183775
• Coordinates: 61869..62864 (+)
• Length: 331 a.a.
• NCBI ID: WP_002269367.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain Xc
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 56869..67864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3C22_RS00345 (V3C22_00345)	-	57172..57858 (+)	687	WP_024782542.1	DNA alkylation repair protein	-
V3C22_RS00350 (V3C22_00350)	comR	58243..59157 (+)	915	WP_226707036.1	helix-turn-helix domain-containing protein	Regulator
V3C22_RS00355 (V3C22_00355)	-	59689..61533 (-)	1845	WP_226707038.1	carbohydrate-binding domain-containing protein	-
V3C22_RS00360 (V3C22_00360)	ruvB	61869..62864 (+)	996	WP_002269367.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
V3C22_RS00365 (V3C22_00365)	-	62902..63327 (+)	426	WP_002303978.1	low molecular weight protein-tyrosine-phosphatase	-
V3C22_RS00370 (V3C22_00370)	-	63392..63775 (+)	384	WP_226707040.1	hypothetical protein	-
V3C22_RS00375 (V3C22_00375)	-	63772..65562 (+)	1791	WP_019313780.1	acyltransferase family protein	-
V3C22_RS00380 (V3C22_00380)	thrC	66244..67728 (+)	1485	WP_226707041.1	threonine synthase	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 37271.71 Da
• Isoelectric Point: 4.7070

>NTDB_id=983217 V3C22_RS00360 WP_002269367.1 61869..62864(+) (ruvB) [Streptococcus mutans strain Xc]
MTRILDNEPMGDEEFAERTLRPQYLQEYIGQDKVKDQLKIFIKAAKQRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAVLNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYTDIDLTEIVERTADIFEMTITHQAALELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DKITDKALTMLDVDHEGLDYVDQKILKTMIEMYHGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIIRTRSGRVATAK
AYEHLGYRYTE

Nucleotide

• Length: 996 bp

>NTDB_id=983217 V3C22_RS00360 WP_002269367.1 61869..62864(+) (ruvB) [Streptococcus mutans strain Xc]
ATGACTAGAATTTTAGATAACGAACCTATGGGTGATGAGGAATTTGCAGAACGCACACTTCGTCCGCAGTATTTACAGGA
ATATATTGGTCAGGATAAGGTTAAAGACCAGCTGAAGATCTTCATCAAAGCAGCTAAACAACGTGATGAGGCTTTGGATC
ATGTCCTTTTATTTGGTCCTCCCGGCCTTGGTAAGACCACCATGGCTTTTGTTATTGCCAATGAATTGGGGGTTAATCTT
AAGCAAACCAGCGGTCCAGCTATTGAAAAAGCTGGTGATTTGGTTGCTGTTTTAAATGATTTAGAGCCTGGGGATGTTCT
TTTTATTGATGAAATTCATCGGCTGCCTATGGCTGTTGAGGAAGTTCTTTATAGTGCCATGGAAGATTTTTATATTGACA
TTATGATTGGTGCGGGAGAAACTTCTCGCAGCGTGCATTTGGATTTGCCGCCTTTTACTTTAATTGGGGCGACAACACGG
GCAGGTATGTTGTCAAATCCTTTGCGGGCGCGTTTTGGGATTACAGGTCATATGGAATATTATACAGATATTGATTTAAC
TGAAATTGTTGAGCGAACAGCGGATATTTTTGAGATGACCATTACCCATCAAGCTGCGTTAGAATTAGCACGGCGTTCCC
GTGGGACTCCGCGTATTGCTAACCGACTCTTAAAACGTGTCCGAGATTATGCCCAAATTATGGGAGATGGTCTTATTGAT
GATAAAATAACAGATAAAGCTTTGACCATGCTTGATGTTGATCATGAAGGCCTTGATTATGTTGATCAGAAGATCCTTAA
GACGATGATTGAGATGTACCATGGCGGGCCTGTTGGTCTGGGGACTCTGTCAGTTAATATTGCCGAGGAACGTGAGACCG
TTGAAGACATGTATGAGCCCTATCTTATTCAAAAGGGATTTATCATACGGACTCGCAGTGGACGTGTAGCCACTGCCAAA
GCTTATGAACATTTGGGTTATCGTTACACAGAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	91.239	100	0.912
ruvB	Streptococcus pneumoniae R6	90.937	100	0.909
ruvB	Streptococcus pneumoniae D39	90.937	100	0.909
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.991	97.583	0.595
ruvB	Helicobacter pylori 26695	50.464	97.583	0.492
ruvB	Synechocystis sp. PCC 6803	50.479	94.562	0.477