Detailed information NTG0983112

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NST32_RS16695
• Genome accession: NZ_CP151978
• Coordinates: 3207016..3207672 (-)
• Length: 218 a.a.
• NCBI ID: WP_260983460.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL L8-0215
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3202016..3212672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST32_RS16660 (NST32_16660)	fliW	3202154..3202588 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NST32_RS16665 (NST32_16665)	-	3202617..3203195 (-)	579	WP_217008718.1	DUF6470 family protein	-
NST32_RS16670 (NST32_16670)	flgL	3203242..3204150 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NST32_RS16675 (NST32_16675)	flgK	3204160..3205680 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NST32_RS16680 (NST32_16680)	-	3205696..3206178 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NST32_RS16685 (NST32_16685)	flgM	3206197..3206460 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST32_RS16690 (NST32_16690)	-	3206540..3206959 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NST32_RS16695 (NST32_16695)	comFC	3207016..3207672 (-)	657	WP_260983460.1	ComF family protein	Machinery gene
NST32_RS16700 (NST32_16700)	-	3207699..3207992 (-)	294	WP_024423623.1	competence protein ComFB	-
NST32_RS16705 (NST32_16705)	comFA	3208041..3209438 (-)	1398	WP_217008717.1	DEAD/DEAH box helicase	Machinery gene
NST32_RS16710 (NST32_16710)	-	3209559..3210401 (-)	843	WP_214755360.1	DegV family protein	-
NST32_RS16715 (NST32_16715)	degU	3210617..3211306 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST32_RS16720 (NST32_16720)	degS	3211371..3212546 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24841.89 Da
• Isoelectric Point: 9.9148

>NTDB_id=983112 NST32_RS16695 WP_260983460.1 3207016..3207672(-) (comFC) [Bacillus sp. FSL L8-0215]
MPAFTWKSFLLLNDDRLCVACKNHLVKIDRPICPTCGRAQSNDQLCQDCNSWNERSDSTKVLVKNRSVYTYNDLMKDVLA
RFKFRGDTALAELFKKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983112 NST32_RS16695 WP_260983460.1 3207016..3207672(-) (comFC) [Bacillus sp. FSL L8-0215]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGATCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAATGATTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.463	99.083	0.5
comFC/cflB	Streptococcus pneumoniae TIGR4	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae Rx1	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae D39	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae R6	37.209	98.624	0.367