Detailed information NTG0982990

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSQ60_RS16700
• Genome accession: NZ_CP151976
• Coordinates: 3210469..3211125 (-)
• Length: 218 a.a.
• NCBI ID: WP_235362365.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL W8-0502
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3205469..3216125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ60_RS16665 (NSQ60_16665)	fliW	3205606..3206040 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSQ60_RS16670 (NSQ60_16670)	-	3206069..3206647 (-)	579	WP_024426253.1	DUF6470 family protein	-
NSQ60_RS16675 (NSQ60_16675)	flgL	3206694..3207602 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSQ60_RS16680 (NSQ60_16680)	flgK	3207612..3209132 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSQ60_RS16685 (NSQ60_16685)	-	3209148..3209630 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSQ60_RS16690 (NSQ60_16690)	flgM	3209649..3209912 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSQ60_RS16695 (NSQ60_16695)	-	3209992..3210411 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSQ60_RS16700 (NSQ60_16700)	comFC	3210469..3211125 (-)	657	WP_235362365.1	ComF family protein	Machinery gene
NSQ60_RS16705 (NSQ60_16705)	-	3211152..3211445 (-)	294	WP_024423623.1	competence protein ComFB	-
NSQ60_RS16710 (NSQ60_16710)	comFA	3211494..3212891 (-)	1398	WP_152649307.1	DEAD/DEAH box helicase	Machinery gene
NSQ60_RS16715 (NSQ60_16715)	-	3213012..3213854 (-)	843	WP_024423625.1	DegV family protein	-
NSQ60_RS16720 (NSQ60_16720)	degU	3214070..3214759 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ60_RS16725 (NSQ60_16725)	degS	3214824..3215999 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24882.01 Da
• Isoelectric Point: 10.0435

>NTDB_id=982990 NSQ60_RS16700 WP_235362365.1 3210469..3211125(-) (comFC) [Bacillus sp. FSL W8-0502]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNSWNERSNSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=982990 NSQ60_RS16700 WP_235362365.1 3210469..3211125(-) (comFC) [Bacillus sp. FSL W8-0502]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTAATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362