Detailed information NTG0982811

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NSQ52_RS16820
• Genome accession: NZ_CP151973
• Coordinates: 3258639..3259814 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus sp. FSL W8-1141
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3253639..3264814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ52_RS16790 (NSQ52_16790)	-	3253815..3254234 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NSQ52_RS16795 (NSQ52_16795)	comFC	3254291..3254977 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
NSQ52_RS16800 (NSQ52_16800)	-	3254974..3255267 (-)	294	WP_008348267.1	competence protein ComFB	-
NSQ52_RS16805 (NSQ52_16805)	comFA	3255332..3256459 (-)	1128	WP_342473620.1	DEAD/DEAH box helicase	Machinery gene
NSQ52_RS16810 (NSQ52_16810)	-	3256831..3257673 (-)	843	WP_342473622.1	DegV family protein	-
NSQ52_RS16815 (NSQ52_16815)	degU	3257885..3258574 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ52_RS16820 (NSQ52_16820)	degS	3258639..3259814 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
NSQ52_RS16825 (NSQ52_16825)	-	3260036..3260704 (+)	669	WP_017357860.1	YigZ family protein	-
NSQ52_RS16830 (NSQ52_16830)	-	3260689..3261786 (+)	1098	WP_024719244.1	LCP family protein	-
NSQ52_RS16835 (NSQ52_16835)	-	3261824..3262891 (-)	1068	WP_007499956.1	MraY family glycosyltransferase	-
NSQ52_RS16840 (NSQ52_16840)	-	3263026..3264273 (-)	1248	WP_144666230.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=982811 NSQ52_RS16820 WP_024719243.1 3258639..3259814(-) (degS) [Bacillus sp. FSL W8-1141]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=982811 NSQ52_RS16820 WP_024719243.1 3258639..3259814(-) (degS) [Bacillus sp. FSL W8-1141]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTGGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAAGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCCCAAGAAGAAGAACGTAAAAGGGTATCCCGTGA
AATTCATGACGGTCCGGCACAGATGCTGGCAAACGTGATGATGCGCTCTGAATTAATTGAACGGATTTTCAGAGATCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAATTCGAAGTGGCAC
TGTTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841