Detailed information NTG0982808

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSQ52_RS16795
• Genome accession: NZ_CP151973
• Coordinates: 3254291..3254977 (-)
• Length: 228 a.a.
• NCBI ID: WP_172793290.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL W8-1141
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3249291..3259977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ52_RS16760 (NSQ52_16760)	fliW	3249427..3249861 (-)	435	WP_203143732.1	flagellar assembly protein FliW	-
NSQ52_RS16765 (NSQ52_16765)	-	3249890..3250468 (-)	579	WP_342473616.1	DUF6470 family protein	-
NSQ52_RS16770 (NSQ52_16770)	flgL	3250515..3251426 (-)	912	WP_039169789.1	flagellar hook-associated protein FlgL	-
NSQ52_RS16775 (NSQ52_16775)	flgK	3251435..3252955 (-)	1521	WP_099496871.1	flagellar hook-associated protein FlgK	-
NSQ52_RS16780 (NSQ52_16780)	-	3252971..3253453 (-)	483	WP_342473618.1	flagellar protein FlgN	-
NSQ52_RS16785 (NSQ52_16785)	flgM	3253472..3253735 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSQ52_RS16790 (NSQ52_16790)	-	3253815..3254234 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NSQ52_RS16795 (NSQ52_16795)	comFC	3254291..3254977 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
NSQ52_RS16800 (NSQ52_16800)	-	3254974..3255267 (-)	294	WP_008348267.1	competence protein ComFB	-
NSQ52_RS16805 (NSQ52_16805)	comFA	3255332..3256459 (-)	1128	WP_342473620.1	DEAD/DEAH box helicase	Machinery gene
NSQ52_RS16810 (NSQ52_16810)	-	3256831..3257673 (-)	843	WP_342473622.1	DegV family protein	-
NSQ52_RS16815 (NSQ52_16815)	degU	3257885..3258574 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ52_RS16820 (NSQ52_16820)	degS	3258639..3259814 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26116.62 Da
• Isoelectric Point: 10.1473

>NTDB_id=982808 NSQ52_RS16795 WP_172793290.1 3254291..3254977(-) (comFC) [Bacillus sp. FSL W8-1141]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=982808 NSQ52_RS16795 WP_172793290.1 3254291..3254977(-) (comFC) [Bacillus sp. FSL W8-1141]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGGATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373