Detailed information NTG0098218

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACAK35_RS01720
• Genome accession: NZ_AP031576
• Coordinates: 358161..359219 (+)
• Length: 352 a.a.
• NCBI ID: WP_005115308.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain JUNP402
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 353161..364219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK35_RS01705 (JUNP402_0340)	-	354267..354599 (+)	333	WP_000169598.1	hypothetical protein	-
ACAK35_RS01710 (JUNP402_0341)	-	354602..355426 (+)	825	WP_001990541.1	putative RNA methyltransferase	-
ACAK35_RS01715 (JUNP402_0342)	ponA	355444..357999 (-)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
ACAK35_RS01720 (JUNP402_0343)	pilM	358161..359219 (+)	1059	WP_005115308.1	pilus assembly protein PilM	Machinery gene
ACAK35_RS01725 (JUNP402_0344)	pilN	359219..359860 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
ACAK35_RS01730 (JUNP402_0345)	pilO	359857..360597 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACAK35_RS01735 (JUNP402_0346)	pilP	360608..361135 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
ACAK35_RS01740 (JUNP402_0347)	pilQ	361198..363363 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
ACAK35_RS01745 (JUNP402_0348)	aroK	363375..363944 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39092.69 Da
• Isoelectric Point: 4.4618

>NTDB_id=98218 ACAK35_RS01720 WP_005115308.1 358161..359219(+) (pilM) [Acinetobacter baumannii strain JUNP402]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFFSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=98218 ACAK35_RS01720 WP_005115308.1 358161..359219(+) (pilM) [Acinetobacter baumannii strain JUNP402]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTTTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterProScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM/pilM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42