Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | R8625_RS09585 | Genome accession | NZ_AP026923 |
| Coordinates | 1847718..1848020 (-) | Length | 100 a.a. |
| NCBI ID | WP_317649158.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700054 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1842718..1853020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8625_RS09550 (PC0054_18580) | rnpA | 1843398..1843769 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| R8625_RS09555 | - | 1843786..1843917 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| R8625_RS09560 (PC0054_18590) | - | 1843918..1845108 (-) | 1191 | WP_000167769.1 | acetate kinase | - |
| R8625_RS09565 (PC0054_18600) | comYH | 1845159..1846112 (-) | 954 | WP_317649157.1 | class I SAM-dependent methyltransferase | Machinery gene |
| R8625_RS09570 | - | 1846173..1846767 (-) | 595 | Protein_1857 | class I SAM-dependent methyltransferase | - |
| R8625_RS09575 (PC0054_18630) | comGG/cglG | 1846870..1847316 (-) | 447 | WP_001811371.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| R8625_RS09580 (PC0054_18640) | comGF/cglF | 1847294..1847755 (-) | 462 | WP_000250523.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| R8625_RS09585 (PC0054_18650) | comGE/cglE | 1847718..1848020 (-) | 303 | WP_317649158.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| R8625_RS09590 (PC0054_18660) | comGD/cglD | 1847983..1848417 (-) | 435 | WP_000608686.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| R8625_RS09595 (PC0054_18670) | comGC/cglC | 1848380..1848643 (-) | 264 | WP_000962025.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| R8625_RS09600 (PC0054_18680) | - | 1848645..1848902 (-) | 258 | WP_000698511.1 | hypothetical protein | - |
| R8625_RS09605 (PC0054_18690) | - | 1849173..1850129 (-) | 957 | WP_219601358.1 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| R8625_RS09610 (PC0054_18700) | - | 1850133..1850465 (-) | 333 | WP_050085269.1 | phage holin | - |
| R8625_RS09615 (PC0054_18710) | - | 1850469..1850768 (-) | 300 | WP_001811580.1 | hypothetical protein | - |
| R8625_RS09620 (PC0054_18720) | - | 1850777..1851127 (-) | 351 | WP_000852245.1 | hypothetical protein | - |
| R8625_RS09625 (PC0054_18730) | - | 1851130..1851333 (-) | 204 | WP_001091109.1 | hypothetical protein | - |
| R8625_RS09630 | - | 1851314..1851430 (-) | 117 | WP_001063633.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11140.14 Da Isoelectric Point: 9.7273
>NTDB_id=98218 R8625_RS09585 WP_317649158.1 1847718..1848020(-) (comGE/cglE) [Streptococcus pneumoniae strain PZ900700054]
MEKLNALRKQKIRAMILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAMILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=98218 R8625_RS09585 WP_317649158.1 1847718..1848020(-) (comGE/cglE) [Streptococcus pneumoniae strain PZ900700054]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAATGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAATGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae D39 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae R6 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
97 |
100 |
0.97 |
| comGE/cglE | Streptococcus mitis SK321 |
97 |
100 |
0.97 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |