Detailed information NTG0098181

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: R8625_RS04510
• Genome accession: NZ_AP026923
• Coordinates: 884434..885387 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495910.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700054
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 879434..890387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8625_RS04485	rpmG	880177..880326 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
R8625_RS04490 (PC0054_08870)	secG	880366..880599 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
R8625_RS04495 (PC0054_08880)	rnr	880701..883055 (+)	2355	WP_000654893.1	ribonuclease R	-
R8625_RS04500 (PC0054_08890)	smpB	883018..883485 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
R8625_RS04505 (PC0054_08900)	tehB	883501..884361 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
R8625_RS04510 (PC0054_08910)	coiA	884434..885387 (+)	954	WP_000495910.1	competence protein CoiA	Machinery gene
R8625_RS04515 (PC0054_08920)	pepF	885406..887208 (+)	1803	WP_000244133.1	oligoendopeptidase F	Regulator
R8625_RS04520 (PC0054_08930)	-	887210..887923 (+)	714	WP_001812425.1	O-methyltransferase	-
R8625_RS04525 (PC0054_08940)	prsA	887990..888931 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
R8625_RS04530 (PC0054_08950)	-	889053..889379 (-)	327	Protein_895	transposase	-
R8625_RS04535	-	889802..889897 (+)	96	Protein_896	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38269.90 Da
• Isoelectric Point: 8.9763

>NTDB_id=98181 R8625_RS04510 WP_000495910.1 884434..885387(+) (coiA) [Streptococcus pneumoniae strain PZ900700054]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=98181 R8625_RS04510 WP_000495910.1 884434..885387(+) (coiA) [Streptococcus pneumoniae strain PZ900700054]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435