NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	ACNR0F_RS01485	Genome accession	NZ_CP183037
Coordinates	275007..277280 (+)	Length	757 a.a.
NCBI ID	WP_038311129.1	Uniprot ID	-
Organism	Kingella kingae strain URMC_2412A945
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 270007..282280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNR0F_RS01445 (ACNR0F_01445)	-	270259..270465 (-)	207	WP_003785517.1	hypothetical protein	-
ACNR0F_RS01450 (ACNR0F_01450)	-	270571..271116 (+)	546	WP_003785518.1	RNA pyrophosphohydrolase	-
ACNR0F_RS01455 (ACNR0F_01455)	rpsT	271177..271440 (-)	264	WP_003785519.1	30S ribosomal protein S20	-
ACNR0F_RS01460 (ACNR0F_01460)	comP	271597..272079 (+)	483	WP_032828136.1	type IV pilin protein	Machinery gene
ACNR0F_RS01465 (ACNR0F_01465)	-	272144..273220 (-)	1077	WP_418604995.1	AI-2E family transporter	-
ACNR0F_RS01470 (ACNR0F_01470)	dusA	273224..274297 (-)	1074	WP_038305076.1	tRNA dihydrouridine(20/20a) synthase DusA	-
ACNR0F_RS01475 (ACNR0F_01475)	-	274320..274523 (-)	204	WP_003785524.1	cold-shock protein	-
ACNR0F_RS01480 (ACNR0F_01480)	clpS	274708..275010 (+)	303	WP_003789543.1	ATP-dependent Clp protease adapter ClpS	-
ACNR0F_RS01485 (ACNR0F_01485)	clpC	275007..277280 (+)	2274	WP_038311129.1	ATP-dependent Clp protease ATP-binding subunit ClpA	Regulator
ACNR0F_RS01490 (ACNR0F_01490)	-	277407..278312 (+)	906	WP_003789547.1	hypothetical protein	-
ACNR0F_RS01495 (ACNR0F_01495)	recB	278322..281978 (+)	3657	WP_418604998.1	exodeoxyribonuclease V subunit beta	Machinery gene

Sequence

Protein

Download Length: 757 a.a. Molecular weight: 83928.51 Da Isoelectric Point: 6.3700

                                >NTDB_id=981447 ACNR0F_RS01485 WP_038311129.1 275007..277280(+) (clpC) [Kingella kingae strain URMC_2412A945]

MISSQLEPILQAMYEEARISRHELVGLEHLLLALIQGDPNVADALREHSAEFSLLLAHLRESIDENTPTYPPHIPSHKID

PQPTIGFQRVVQRAMIHVQQSSQTEVQAADLLLALMQEEESPAVFLLQLHGVERKDLLRYFSHGTSSLHSSQHHDDDDDS

NLADNPLEAYTVNLNAEVQAARIDPLIGRKMEMERVLQILCRRRKNNPLLVGEAGVGKTALAEGLAYLIEQKQVPDVLAN

ATVFALDMGALLAGAKYRGDFEARLKAVLKELAKVENAVLFIDEIHTVIGAGSTQGNNMDASNLLKPALAKGQLRCIGAT

TYEEYRTVFNKDHALSRRFQKIDVVEPTVAETVQILQGLRPMFEQHHSVEYLDEAFQAAAELSAKYINERFLPDKAIDII

DEAGAAQRIALPENRLTQINKVEIERIVAKIARIPETTVSHDDKQVLKTLADTLKRKVFGQDNAIEALVSAVKMSRSGLG

LPEKPIGSFLFSGPTGVGKTEVAKQLALELGVPLQRFDMSEYMEAHAVSRLIGAPPGYVGFEQGGLLTECINKQPHCVLL

LDEIEKAHRDIYNVLLQVMDAGKLTDNTGRSADFRNVIIIMTTNAGAEALSKPSFGFTSKRERGDEMVDIKKLFTPEFRN

RLDAIIPFAPLSPEIIAKVVDKFLAQLAAQLADKKVVAEFGDAMRKHLAAKGFDPQMGARPMHRLIQEQIRKALADELLF

GKLTDGGFVLVDWDEKTQKAKLSFKKPRVSRKKAELA

Nucleotide

Download Length: 2274 bp

                                >NTDB_id=981447 ACNR0F_RS01485 WP_038311129.1 275007..277280(+) (clpC) [Kingella kingae strain URMC_2412A945]

ATGATTTCATCTCAATTAGAACCGATTTTGCAAGCCATGTATGAAGAGGCGCGTATCAGCCGTCATGAACTGGTGGGCTT

GGAGCATTTGCTGCTGGCTTTGATTCAGGGCGACCCCAATGTTGCCGATGCTTTGCGCGAACACAGCGCGGAATTTTCGT

TGCTGCTGGCACATTTGCGCGAAAGCATAGACGAAAACACGCCCACTTATCCGCCGCATATTCCCAGCCACAAGATTGAC

CCACAGCCGACTATTGGCTTTCAGCGCGTGGTGCAGCGAGCGATGATTCATGTGCAACAGTCATCGCAAACCGAAGTGCA

GGCTGCCGATTTGTTGCTGGCGTTGATGCAGGAAGAAGAATCTCCTGCGGTATTTTTATTGCAACTGCATGGCGTGGAGC

GCAAAGATTTGTTGCGCTATTTTTCGCATGGCACAAGCAGCCTGCACTCATCGCAGCATCATGATGATGACGATGACAGC

AATCTTGCCGATAATCCATTGGAAGCCTACACCGTAAACCTGAATGCCGAAGTGCAGGCTGCTCGCATTGACCCCTTAAT

CGGGCGCAAAATGGAAATGGAACGCGTATTGCAAATTCTGTGTCGCCGCCGCAAAAATAATCCGCTTTTGGTTGGCGAAG

CTGGCGTAGGTAAAACCGCGTTGGCGGAGGGGTTGGCGTATTTAATTGAACAAAAACAAGTACCTGACGTGTTGGCAAAT

GCAACTGTTTTCGCGTTGGATATGGGCGCGTTGTTGGCTGGTGCGAAATATCGTGGCGATTTTGAAGCGCGTTTGAAAGC

GGTGCTGAAAGAATTGGCAAAAGTGGAAAATGCGGTTTTATTTATTGATGAAATTCATACAGTTATCGGTGCAGGCAGCA

CGCAAGGCAACAATATGGACGCGAGTAATTTGCTCAAACCTGCGTTGGCGAAAGGGCAACTGCGCTGCATTGGCGCGACC

ACTTACGAAGAATATCGCACCGTGTTCAACAAAGACCACGCGCTGAGTCGCCGTTTTCAAAAAATTGATGTGGTTGAGCC

GACTGTGGCGGAAACGGTGCAAATTTTGCAAGGTTTGCGCCCGATGTTTGAGCAACATCACAGCGTTGAATATTTGGACG

AGGCGTTTCAGGCAGCCGCCGAATTGTCGGCAAAATACATCAACGAGCGTTTTTTGCCTGACAAAGCCATTGATATTATT

GACGAAGCAGGCGCGGCGCAACGAATCGCGCTGCCTGAAAATCGTTTAACGCAAATCAATAAAGTGGAAATTGAACGCAT

TGTCGCCAAAATCGCCCGAATCCCTGAAACAACGGTTTCGCATGATGACAAACAGGTTTTGAAAACGCTTGCCGATACGC

TGAAACGCAAAGTTTTTGGGCAGGATAATGCGATTGAAGCGCTGGTTTCTGCTGTGAAAATGTCGCGTTCGGGTTTGGGG

CTGCCTGAAAAACCGATTGGCAGTTTTTTGTTTAGCGGTCCGACTGGCGTGGGCAAGACGGAAGTGGCGAAACAGTTGGC

GTTGGAATTGGGTGTACCGTTGCAACGCTTTGATATGTCTGAATATATGGAAGCGCATGCGGTTTCGCGTTTGATTGGTG

CGCCACCAGGCTATGTGGGTTTTGAACAAGGCGGTTTGCTGACGGAATGTATTAACAAACAGCCACATTGCGTTTTGCTG

TTGGACGAAATTGAGAAAGCGCACCGCGATATTTACAATGTGTTGCTGCAAGTGATGGACGCGGGCAAATTGACGGACAA

CACGGGACGCAGCGCGGATTTTCGCAATGTCATCATCATCATGACAACCAACGCAGGTGCGGAAGCGTTGAGCAAACCGA

GTTTTGGTTTTACCAGCAAACGCGAACGCGGCGATGAAATGGTGGACATCAAAAAATTGTTTACGCCTGAATTTCGCAAT

CGTTTAGATGCGATTATTCCGTTTGCGCCATTGTCGCCTGAAATCATTGCGAAAGTGGTAGATAAATTTTTGGCGCAGTT

GGCGGCGCAGTTGGCGGACAAAAAAGTGGTGGCGGAGTTTGGCGATGCGATGCGTAAACATTTGGCGGCAAAAGGTTTTG

ACCCACAAATGGGCGCACGTCCTATGCACCGTTTGATTCAAGAGCAAATTCGTAAGGCGTTGGCTGATGAGTTGCTGTTT

GGCAAATTGACGGACGGTGGTTTTGTGTTGGTGGATTGGGACGAGAAGACGCAGAAAGCGAAATTGTCGTTTAAAAAACC

GCGAGTTAGCCGCAAGAAAGCGGAATTGGCGTAA