Detailed information NTG0098027

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: R9C51_RS04880
• Genome accession: NZ_AP026921
• Coordinates: 938437..939390 (+)
• Length: 317 a.a.
• NCBI ID: WP_050232672.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700027
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 933437..944390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9C51_RS04855	rpmG	934180..934329 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
R9C51_RS04860 (PC0027_09590)	secG	934369..934602 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
R9C51_RS04865 (PC0027_09600)	rnr	934704..937058 (+)	2355	WP_050224419.1	ribonuclease R	-
R9C51_RS04870 (PC0027_09610)	smpB	937021..937488 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
R9C51_RS04875 (PC0027_09620)	tehB	937504..938364 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
R9C51_RS04880 (PC0027_09630)	coiA	938437..939390 (+)	954	WP_050232672.1	competence protein CoiA	Machinery gene
R9C51_RS04885 (PC0027_09640)	pepF	939409..941211 (+)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
R9C51_RS04890 (PC0027_09650)	-	941213..941926 (+)	714	WP_000230399.1	O-methyltransferase	-
R9C51_RS04895 (PC0027_09660)	prsA	941993..942934 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
R9C51_RS04900 (PC0027_09670)	-	943053..943394 (-)	342	Protein_968	transposase	-
R9C51_RS04905	-	943806..943901 (+)	96	Protein_969	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38259.91 Da
• Isoelectric Point: 8.9865

>NTDB_id=98027 R9C51_RS04880 WP_050232672.1 938437..939390(+) (coiA) [Streptococcus pneumoniae strain PZ900700027]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSLLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=98027 R9C51_RS04880 WP_050232672.1 938437..939390(+) (coiA) [Streptococcus pneumoniae strain PZ900700027]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCTCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435