Detailed information NTG0098022

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: ABXH21_RS07160
• Genome accession: NZ_AP031472
• Coordinates: 1596453..1597385 (-)
• Length: 310 a.a.
• NCBI ID: WP_036604649.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain NBRC 115781
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1591453..1602385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH21_RS07150 (SKB0120_13960)	-	1592416..1593846 (-)	1431	WP_353550955.1	hypothetical protein	-
ABXH21_RS07155 (SKB0120_13970)	-	1594333..1596381 (+)	2049	WP_353550956.1	hypothetical protein	-
ABXH21_RS07160 (SKB0120_13980)	ruvB	1596453..1597385 (-)	933	WP_036604649.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ABXH21_RS07165 (SKB0120_13990)	-	1597531..1597983 (-)	453	WP_353550957.1	hypothetical protein	-
ABXH21_RS07170 (SKB0120_14000)	gcvT	1598862..1599995 (+)	1134	WP_353550958.1	glycine cleavage system aminomethyltransferase GcvT	-
ABXH21_RS07175 (SKB0120_14010)	-	1600109..1600495 (+)	387	WP_219300314.1	MliC family protein	-
ABXH21_RS07180 (SKB0120_14020)	gcvH	1600740..1601120 (+)	381	WP_036604652.1	glycine cleavage system protein GcvH	-
ABXH21_RS07185 (SKB0120_14030)	-	1601253..1601987 (+)	735	WP_309595994.1	nitroreductase family protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 33977.06 Da
• Isoelectric Point: 5.1184

>NTDB_id=98022 ABXH21_RS07160 WP_036604649.1 1596453..1597385(-) (ruvB) [Moraxella osloensis strain NBRC 115781]
MGRSEDQNDNNIRPALLAEYIGQPVVKEQMGVFINAALSRKEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVL
ERAGDLAAMLTNLEPGDVLFIDEIHRLSPMIEEILYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPL
RDRFGIVQRLEFYNVADLTTIVTRSAGLLNVPMTKEGAVEVARRSRGTPRIANRLLRRVRDYAQVKGDGTVTAEIAHSAL
DMLAVDKRGLDNLDRRYLEMLEERFNGGPAGVESIAAALAEDRGTLEDVIEPYLIQQGYIVRTARGRMLT

Nucleotide

• Length: 933 bp

>NTDB_id=98022 ABXH21_RS07160 WP_036604649.1 1596453..1597385(-) (ruvB) [Moraxella osloensis strain NBRC 115781]
ATGGGGCGCTCAGAAGACCAAAATGACAATAATATCCGTCCAGCGTTGCTCGCTGAATATATCGGTCAGCCTGTGGTCAA
AGAACAAATGGGCGTGTTTATCAACGCCGCATTATCGAGAAAAGAAGCGCTCGACCATACATTGATATTTGGACCGCCTG
GACTGGGTAAAACCACACTCGCCAACATTATCGCCCGTGAGATGGGCGGTAATCTGCGCTCGACGTCTGGTCCTGTGCTT
GAACGCGCGGGTGATTTGGCAGCAATGCTGACCAATCTAGAGCCTGGTGATGTGCTGTTTATTGATGAGATTCACCGTTT
AAGCCCGATGATTGAAGAAATATTGTATCCTGCGATGGAAGATTTTCAGCTGGATATTATGATTGGCGAAGGACCGGCTG
CACGCTCAATAAAGCTTGATTTGCCGCCTTTTACTTTGGTGGCTGCGACCACGCGAGCAGGTTTGTTGACCTCGCCACTG
CGCGATAGATTTGGTATTGTACAGCGATTGGAGTTTTATAATGTGGCGGATTTAACGACCATTGTCACAAGGTCGGCTGG
ATTGCTTAACGTGCCTATGACCAAAGAAGGCGCAGTGGAAGTCGCTAGACGGTCGCGCGGTACACCGCGTATTGCCAATC
GCTTGCTACGCCGCGTACGTGATTATGCCCAAGTTAAAGGCGATGGCACCGTCACCGCTGAAATTGCCCATAGCGCACTT
GATATGCTGGCAGTTGACAAACGCGGGCTTGATAATCTTGATAGACGTTATCTTGAGATGTTAGAGGAGCGTTTTAATGG
CGGGCCTGCGGGGGTTGAGTCGATTGCGGCGGCTTTGGCAGAAGATAGAGGCACGCTTGAAGATGTGATTGAGCCGTATC
TGATTCAGCAAGGCTATATCGTACGCACCGCACGGGGGCGGATGTTGACTTAG

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (248-310)

• RuvB AAA lid domain (AAA_lid_4) (173-246)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	62.914	97.419	0.613
ruvB	Streptococcus pneumoniae TIGR4	57.843	98.71	0.571
ruvB	Streptococcus pneumoniae R6	57.843	98.71	0.571
ruvB	Streptococcus pneumoniae D39	57.843	98.71	0.571
ruvB	Synechocystis sp. PCC 6803	56.393	98.387	0.555
ruvB	Helicobacter pylori 26695	54.575	98.71	0.539