Detailed information NTG0979003

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AACL51_RS28465
• Genome accession: NZ_CP151537
• Coordinates: 6065332..6066396 (+)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PA98zyfcau
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6060332..6071396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACL51_RS28455 (AACL51_28455)	-	6061307..6062575 (+)	1269	WP_004347579.1	malic enzyme-like NAD(P)-binding protein	-
AACL51_RS28460 (AACL51_28460)	-	6062676..6065147 (-)	2472	WP_116825408.1	penicillin-binding protein 1A	-
AACL51_RS28465 (AACL51_28465)	pilM	6065332..6066396 (+)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
AACL51_RS28470 (AACL51_28470)	pilN	6066396..6066992 (+)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
AACL51_RS28475 (AACL51_28475)	pilO	6066989..6067612 (+)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
AACL51_RS28480 (AACL51_28480)	pilP	6067609..6068133 (+)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
AACL51_RS28485 (AACL51_28485)	pilQ	6068187..6070331 (+)	2145	WP_003146401.1	type 4a pilus secretin PilQ	Machinery gene
AACL51_RS28490 (AACL51_28490)	aroK	6070343..6070861 (+)	519	WP_003095833.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=979003 AACL51_RS28465 WP_003110888.1 6065332..6066396(+) (pilM) [Pseudomonas aeruginosa strain PA98zyfcau]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=979003 AACL51_RS28465 WP_003110888.1 6065332..6066396(+) (pilM) [Pseudomonas aeruginosa strain PA98zyfcau]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTTGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466