Detailed information NTG0097714

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: R8563_RS04580
• Genome accession: NZ_AP026917
• Coordinates: 886941..887894 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495907.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700007
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 881941..892894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8563_RS04555	rpmG	882684..882833 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
R8563_RS04560 (PC0007_08880)	secG	882873..883106 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
R8563_RS04565 (PC0007_08890)	rnr	883208..885562 (+)	2355	WP_054363463.1	ribonuclease R	-
R8563_RS04570 (PC0007_08900)	smpB	885525..885992 (+)	468	WP_001051753.1	SsrA-binding protein SmpB	-
R8563_RS04575 (PC0007_08910)	tehB	886008..886868 (+)	861	WP_000413758.1	SAM-dependent methyltransferase TehB	-
R8563_RS04580 (PC0007_08920)	coiA	886941..887894 (+)	954	WP_000495907.1	competence protein CoiA	Machinery gene
R8563_RS04585 (PC0007_08930)	pepF	887913..889715 (+)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
R8563_RS04590 (PC0007_08940)	-	889717..890430 (+)	714	WP_078152034.1	O-methyltransferase	-
R8563_RS04595 (PC0007_08950)	prsA	890497..891438 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
R8563_RS04600	-	891555..891641 (-)	87	Protein_908	IS3 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38215.81 Da
• Isoelectric Point: 8.8381

>NTDB_id=97714 R8563_RS04580 WP_000495907.1 886941..887894(+) (coiA) [Streptococcus pneumoniae strain PZ900700007]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIQQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=97714 R8563_RS04580 WP_000495907.1 886941..887894(+) (coiA) [Streptococcus pneumoniae strain PZ900700007]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCAGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432