Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AADH33_RS02020 Genome accession   NZ_CP151283
Coordinates   483512..483889 (+) Length   125 a.a.
NCBI ID   WP_317053280.1    Uniprot ID   A0AAU6S1J0
Organism   Psychrobacter sp. KFRI-CH2-11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 478512..488889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADH33_RS02010 (AADH33_02010) - 480308..481030 (-) 723 WP_058025471.1 response regulator transcription factor -
  AADH33_RS02015 (AADH33_02015) - 481322..482620 (-) 1299 WP_348549394.1 HlyD family efflux transporter periplasmic adaptor subunit -
  AADH33_RS02020 (AADH33_02020) pilG 483512..483889 (+) 378 WP_317053280.1 twitching motility response regulator PilG Regulator
  AADH33_RS02025 (AADH33_02025) - 484135..484497 (+) 363 WP_207970054.1 response regulator -
  AADH33_RS02030 (AADH33_02030) - 484501..485031 (+) 531 WP_100750037.1 chemotaxis protein CheW -
  AADH33_RS02035 (AADH33_02035) - 485536..486621 (+) 1086 Protein_389 methyl-accepting chemotaxis protein -
  AADH33_RS02040 (AADH33_02040) - 486679..487659 (+) 981 WP_348549395.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14055.16 Da        Isoelectric Point: 4.5935

>NTDB_id=976075 AADH33_RS02020 WP_317053280.1 483512..483889(+) (pilG) [Psychrobacter sp. KFRI-CH2-11]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
DKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFDAIKQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=976075 AADH33_RS02020 WP_317053280.1 483512..483889(+) (pilG) [Psychrobacter sp. KFRI-CH2-11]
ATGGAAAATAATTTTGATGGCTTAAAAGTGATGGTGATTGATGATTCCAAAACCATTCGCCGTACTGCAGAAACCTTGTT
ACAAAAGGCTGGCTGTGAAGTTGTAACTGCTATTGATGGCTTTGATGCACTTGCAAAGATTGTCGATAACAATCCCGATA
TTATTTTTGTGGATATTATGATGCCACGTTTAGATGGTTATCAAACCTGTGCTTTGATCAAAAACAACCCTGATTATGCC
GACAAGCCTGTAATCATGTTGTCATCTAAAGACGGTTTGTTTGATAAAGCACGCGGCCGTATCGTGGGCTCTGATGAGTA
TCTGACCAAGCCATTTAGTAAAGACGAGCTGTTTGACGCGATCAAGCAATATCGCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.419

99.2

0.768
  vicR Streptococcus mutans UA159

41.379

92.8

0.384
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  micA Streptococcus pneumoniae Cp1015

40.351

91.2

0.368

Multiple sequence alignment