Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   AAC899_RS11810 Genome accession   NZ_CP151168
Coordinates   2484095..2486521 (-) Length   808 a.a.
NCBI ID   WP_218262405.1    Uniprot ID   -
Organism   Acinetobacter soli strain HY24     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2479095..2491521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS11785 (AAC899_11785) purM 2479419..2480489 (+) 1071 WP_004939407.1 phosphoribosylformylglycinamidine cyclo-ligase -
  AAC899_RS11790 (AAC899_11790) purN 2480486..2481118 (+) 633 WP_048765810.1 phosphoribosylglycinamide formyltransferase -
  AAC899_RS11795 (AAC899_11795) - 2481178..2481981 (-) 804 WP_218262407.1 alpha/beta hydrolase -
  AAC899_RS11800 (AAC899_11800) sppA 2481996..2483012 (-) 1017 WP_004939415.1 signal peptide peptidase SppA -
  AAC899_RS11805 (AAC899_11805) - 2483146..2484162 (+) 1017 WP_218262406.1 lysophospholipid acyltransferase family protein -
  AAC899_RS11810 (AAC899_11810) comA/comEC 2484095..2486521 (-) 2427 WP_218262405.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AAC899_RS11815 (AAC899_11815) lolD 2486599..2487285 (-) 687 WP_004939423.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  AAC899_RS11820 (AAC899_11820) - 2487278..2488513 (-) 1236 WP_004939428.1 lipoprotein-releasing ABC transporter permease subunit -
  AAC899_RS11825 (AAC899_11825) - 2488855..2489760 (-) 906 WP_218262404.1 EamA family transporter -
  AAC899_RS11830 (AAC899_11830) - 2489769..2490236 (-) 468 WP_004939433.1 YaiI/YqxD family protein -
  AAC899_RS11835 (AAC899_11835) - 2490458..2491396 (+) 939 WP_004948725.1 hypothetical protein -

Sequence


Protein


Download         Length: 808 a.a.        Molecular weight: 91342.98 Da        Isoelectric Point: 8.1127

>NTDB_id=975585 AAC899_RS11810 WP_218262405.1 2484095..2486521(-) (comA/comEC) [Acinetobacter soli strain HY24]
MLKLIFLGWIAGIATMGHIFDPISAVTLGIAIGLYFLFLLIYLRVAQQFNSSKLLGGLLGIFSVCLSFSCGVYYADQALT
TRLEHRVTTSSVDSYIIYINRMGEQSQNGIRQPAQILNENDAPIHWVLSIDETVIPADTMAHSLAVGQYYRAVIQRQPVH
GYATQGAFDVEKWFVQQNWQGRGKVVQLEMLSSEQALREGYYDHVKQQQSWTRKFLLAAEHLRLKFRGYFLASSLQHQSL
LLALLTGDRSLLDPELEQQFQRFGISHLLAISGPHVLIFAALMTWCIIQLINRYYAAIYLVIPRQRLMLIPFLLCVLLYC
ALVGFEIPALRTLLTVTIVSIFILLKHPVHASFLLLFSASILLLIDPFSILSAAFWLSYGACFILIRIYQEIVQEQKTGQ
SWRIRIGYAAQLLIRTQWKIFLALLPLTLLLFKQFSWMTPFANIIAIPVLGAIVVPLDVIAACFWLILPALGHLIFQLND
GVLQAVLGLFNMMDHIFAPELQYFALRPWMIISISFGILILFLPKGTVPKCWSIICCVPVFLLAQLKSPTQLVVLDVGQG
QSVLIQDQTQRILLDTGGNHDEQKFSVGRQVVVPFLKAQGVKQLDRIILSHLDQDHSGALPAILDAISVTQIQANEPMPK
LQSTFELCYAGQRFETPETIIQVLSPALQEIGRADTNRNESSCVMHIEFKNNQPIRHFLIMGDAGWETEFKLLQHYPDLR
VDVLVLGHHGSRHSSAYDFLQHYRPQYAIASAGATNRYGHPSIEVQVRLAALQIPLLSTAKAGSISFSFDQANEQPRFYR
HQYRWLTQ

Nucleotide


Download         Length: 2427 bp        

>NTDB_id=975585 AAC899_RS11810 WP_218262405.1 2484095..2486521(-) (comA/comEC) [Acinetobacter soli strain HY24]
ATGCTAAAGCTTATTTTTCTGGGGTGGATTGCAGGAATTGCAACCATGGGGCATATATTTGATCCCATATCGGCTGTCAC
ACTCGGTATCGCGATCGGTCTATATTTCCTATTTTTACTCATCTATCTACGTGTGGCCCAACAGTTTAACTCTTCGAAAT
TGTTAGGCGGCTTATTGGGCATCTTTTCGGTGTGTTTGTCGTTTAGCTGTGGCGTCTATTACGCCGATCAGGCACTCACC
ACACGGCTTGAGCATCGTGTCACGACCTCTTCAGTCGACTCATACATCATCTACATCAATCGTATGGGGGAGCAGTCTCA
AAACGGAATCAGACAGCCTGCACAGATTCTCAATGAAAATGATGCTCCCATTCACTGGGTACTTTCCATAGATGAAACAG
TTATCCCTGCTGATACCATGGCGCATAGTTTAGCTGTTGGGCAGTATTATCGTGCCGTGATTCAGCGTCAACCTGTGCAT
GGTTACGCTACACAAGGTGCATTCGATGTAGAAAAATGGTTCGTACAACAAAACTGGCAAGGGCGTGGCAAAGTTGTACA
ACTCGAAATGCTTTCAAGTGAACAGGCGCTACGTGAAGGATATTATGATCATGTGAAACAGCAACAATCTTGGACTCGAA
AATTTTTGCTTGCTGCCGAGCACTTAAGATTAAAATTTAGAGGCTATTTTCTTGCTTCTTCCTTACAACATCAAAGCTTA
CTTCTGGCCTTACTCACGGGCGATCGAAGTCTTCTTGATCCTGAGCTTGAGCAGCAGTTTCAACGCTTTGGTATTTCACA
TTTGCTGGCGATATCTGGGCCGCATGTGCTTATTTTTGCAGCGCTGATGACATGGTGTATTATCCAATTGATCAATCGAT
ACTACGCCGCAATTTATTTGGTGATTCCACGCCAGCGACTGATGCTGATTCCATTTTTATTATGCGTACTCCTCTATTGC
GCGTTGGTGGGGTTTGAAATTCCTGCTCTAAGAACGCTGCTGACCGTAACCATAGTGAGTATTTTCATACTTTTAAAACA
TCCCGTACATGCCAGTTTCTTGTTGCTGTTCAGTGCTTCTATTTTATTACTCATCGATCCGTTTAGCATACTCTCGGCAG
CATTCTGGCTATCTTATGGGGCCTGTTTTATTCTGATTCGTATTTATCAGGAAATTGTGCAGGAGCAAAAGACTGGTCAA
TCTTGGCGTATTCGAATCGGATATGCTGCGCAGCTTCTTATCAGAACACAATGGAAAATCTTTCTCGCACTGTTACCCCT
GACCTTATTGCTCTTTAAACAGTTTTCTTGGATGACTCCATTTGCCAATATCATTGCCATTCCAGTTCTGGGTGCCATCG
TGGTGCCTTTAGATGTTATCGCCGCATGCTTCTGGCTCATCCTTCCTGCACTTGGGCATTTGATTTTTCAACTCAATGAT
GGGGTATTACAGGCTGTTTTGGGTCTGTTTAATATGATGGATCATATCTTTGCACCGGAGTTACAATATTTTGCACTTCG
TCCTTGGATGATCATCAGCATTTCATTTGGCATTTTAATTTTATTTTTGCCTAAAGGCACAGTGCCTAAATGCTGGTCAA
TCATATGCTGTGTGCCTGTTTTTCTACTTGCACAATTAAAATCACCTACCCAATTAGTGGTGTTAGATGTCGGTCAAGGA
CAGTCTGTGCTCATCCAAGATCAAACACAACGAATACTGCTCGATACTGGCGGCAATCACGACGAGCAAAAGTTTAGTGT
AGGTAGGCAGGTGGTGGTGCCATTTTTGAAGGCACAGGGCGTAAAGCAGCTAGACCGAATTATACTGTCACATTTAGATC
AAGATCATAGCGGGGCATTACCCGCGATTCTGGATGCAATATCGGTTACGCAGATTCAAGCCAATGAACCAATGCCTAAA
CTTCAATCTACTTTTGAGCTGTGCTATGCCGGACAGCGTTTTGAGACACCTGAAACCATTATACAAGTTTTATCACCAGC
GCTTCAGGAGATCGGACGTGCTGATACGAATCGAAATGAATCGTCATGTGTTATGCATATCGAGTTTAAAAACAATCAAC
CCATACGACATTTTTTAATTATGGGAGATGCAGGTTGGGAAACCGAGTTTAAATTACTTCAACATTATCCGGATCTGCGC
GTAGATGTTTTGGTTTTGGGGCATCACGGGAGTCGTCATAGTTCAGCCTATGATTTTTTACAGCATTATCGGCCTCAATA
TGCGATTGCATCGGCAGGTGCAACCAATCGTTATGGCCATCCTAGTATTGAAGTTCAGGTACGACTGGCAGCGTTACAAA
TTCCTTTACTCAGCACAGCCAAAGCAGGTAGTATTTCTTTTAGTTTTGATCAAGCGAATGAGCAGCCACGTTTTTATCGC
CATCAATACCGCTGGTTAACACAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

56.576

99.752

0.564

  comA/comEC Acinetobacter baumannii D1279779

47.793

98.144

0.469

  comA/comEC Acinetobacter baumannii strain A118

47.793

98.144

0.469


Multiple sequence alignment