Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AAC899_RS00970 | Genome accession | NZ_CP151168 |
| Coordinates | 214997..215569 (+) | Length | 190 a.a. |
| NCBI ID | WP_076033164.1 | Uniprot ID | - |
| Organism | Acinetobacter soli strain HY24 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 209997..220569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAC899_RS00940 (AAC899_00940) | - | 210308..210661 (+) | 354 | WP_004944844.1 | DUF1304 domain-containing protein | - |
| AAC899_RS00945 (AAC899_00945) | - | 210739..211080 (+) | 342 | WP_004934029.1 | GlpM family protein | - |
| AAC899_RS00950 (AAC899_00950) | - | 211123..211434 (+) | 312 | WP_208477703.1 | hypothetical protein | - |
| AAC899_RS00955 (AAC899_00955) | tenA | 211485..212156 (-) | 672 | WP_004934034.1 | thiaminase II | - |
| AAC899_RS00960 (AAC899_00960) | - | 212358..213440 (+) | 1083 | WP_004934038.1 | DUF475 domain-containing protein | - |
| AAC899_RS00965 (AAC899_00965) | - | 213581..214945 (+) | 1365 | WP_004934041.1 | MFS transporter | - |
| AAC899_RS00970 (AAC899_00970) | ssb | 214997..215569 (+) | 573 | WP_076033164.1 | single-stranded DNA-binding protein | Machinery gene |
| AAC899_RS00975 (AAC899_00975) | - | 216024..217463 (+) | 1440 | WP_004944848.1 | amino acid permease | - |
| AAC899_RS00980 (AAC899_00980) | - | 217533..219032 (-) | 1500 | WP_048765311.1 | PLP-dependent aminotransferase family protein | - |
| AAC899_RS00985 (AAC899_00985) | gabT | 219184..220479 (+) | 1296 | WP_004944850.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 190 a.a. Molecular weight: 20902.67 Da Isoelectric Point: 7.0146
>NTDB_id=975558 AAC899_RS00970 WP_076033164.1 214997..215569(+) (ssb) [Acinetobacter soli strain HY24]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLNNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGEQPMGGGQDYNQPRFNNNAPQNTGYNNQGGGYNNKNNAGANQGGGY
GNNAAGNQGGYAPKAPQQPAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLNNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGEQPMGGGQDYNQPRFNNNAPQNTGYNNQGGGYNNKNNAGANQGGGY
GNNAAGNQGGYAPKAPQQPAPADLDDDLPF
Nucleotide
Download Length: 573 bp
>NTDB_id=975558 AAC899_RS00970 WP_076033164.1 214997..215569(+) (ssb) [Acinetobacter soli strain HY24]
ATGCGTGGTGTGAATAAAGTAATTTTAGTTGGGACCTTGGGCCGTGACCCGGAAACCAAAACGTTTCCAAATGGCGGGTC
ATTGACTCAATTTTCGATTGCAACCAGCGAATCGTGGACAGATAAAAGTACGGGTGAGCGTAAAGAGCAAACCGAATGGC
ATCGTATTGTGTTGAATAACCGTTTAGGTGAAATTGCACAGCAATACCTGCGTAAAGGTTCGAAAGTGTACATTGAGGGT
TCGTTACGTACCCGCCAGTGGACAGACCAAAACGGTCAAGAGCGCTATACCACCGAAATTCGTGGCGACCAGATGCAAAT
GCTTGATACACGTAGCCAAGGCGAGCAGCCTATGGGTGGTGGTCAGGACTACAATCAGCCACGCTTTAACAACAATGCAC
CGCAAAACACCGGCTACAACAACCAAGGCGGTGGTTATAACAACAAAAATAACGCTGGTGCCAATCAAGGTGGCGGTTAT
GGCAACAATGCTGCGGGCAATCAAGGTGGTTATGCGCCTAAAGCTCCACAGCAACCTGCTCCAGCAGATCTAGACGACGA
CTTACCTTTTTAA
ATGCGTGGTGTGAATAAAGTAATTTTAGTTGGGACCTTGGGCCGTGACCCGGAAACCAAAACGTTTCCAAATGGCGGGTC
ATTGACTCAATTTTCGATTGCAACCAGCGAATCGTGGACAGATAAAAGTACGGGTGAGCGTAAAGAGCAAACCGAATGGC
ATCGTATTGTGTTGAATAACCGTTTAGGTGAAATTGCACAGCAATACCTGCGTAAAGGTTCGAAAGTGTACATTGAGGGT
TCGTTACGTACCCGCCAGTGGACAGACCAAAACGGTCAAGAGCGCTATACCACCGAAATTCGTGGCGACCAGATGCAAAT
GCTTGATACACGTAGCCAAGGCGAGCAGCCTATGGGTGGTGGTCAGGACTACAATCAGCCACGCTTTAACAACAATGCAC
CGCAAAACACCGGCTACAACAACCAAGGCGGTGGTTATAACAACAAAAATAACGCTGGTGCCAATCAAGGTGGCGGTTAT
GGCAACAATGCTGCGGGCAATCAAGGTGGTTATGCGCCTAAAGCTCCACAGCAACCTGCTCCAGCAGATCTAGACGACGA
CTTACCTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
54.737 |
100 |
0.547 |
| ssb | Vibrio cholerae strain A1552 |
43.434 |
100 |
0.453 |
| ssb | Neisseria meningitidis MC58 |
39.896 |
100 |
0.405 |
| ssb | Neisseria gonorrhoeae MS11 |
39.896 |
100 |
0.405 |