Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   AAAF57_RS05490 Genome accession   NZ_CP150847
Coordinates   1222876..1224219 (-) Length   447 a.a.
NCBI ID   WP_410536163.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS5     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217876..1229219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAAF57_RS05460 (AAAF57_05505) - 1218059..1218439 (-) 381 WP_410536161.1 DUF1934 domain-containing protein -
  AAAF57_RS05465 (AAAF57_05510) - 1218522..1219388 (-) 867 WP_288587243.1 GNAT family N-acetyltransferase -
  AAAF57_RS05470 (AAAF57_05515) yidA 1219566..1220375 (+) 810 WP_002890845.1 sugar-phosphatase -
  AAAF57_RS05475 (AAAF57_05520) - 1220377..1221591 (+) 1215 WP_073687783.1 aminoacyltransferase -
  AAAF57_RS05480 (AAAF57_05525) - 1221643..1222002 (-) 360 WP_037611660.1 YbaN family protein -
  AAAF57_RS05485 (AAAF57_05530) vicX 1222061..1222870 (-) 810 WP_126405093.1 MBL fold metallo-hydrolase Regulator
  AAAF57_RS05490 (AAAF57_05535) vicK 1222876..1224219 (-) 1344 WP_410536163.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AAAF57_RS05495 (AAAF57_05540) vicR 1224212..1224919 (-) 708 WP_002884978.1 response regulator YycF Regulator
  AAAF57_RS05500 (AAAF57_05545) - 1225204..1225971 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  AAAF57_RS05505 (AAAF57_05550) - 1226072..1226815 (+) 744 WP_410536165.1 transporter substrate-binding domain-containing protein -
  AAAF57_RS05510 (AAAF57_05555) - 1226833..1227531 (+) 699 WP_002886251.1 amino acid ABC transporter permease -
  AAAF57_RS05515 (AAAF57_05560) - 1227543..1228193 (+) 651 WP_002886253.1 amino acid ABC transporter permease -
  AAAF57_RS05520 (AAAF57_05565) - 1228381..1229148 (+) 768 WP_037604317.1 amino acid ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 447 a.a.        Molecular weight: 51061.24 Da        Isoelectric Point: 4.9286

>NTDB_id=972967 AAAF57_RS05490 WP_410536163.1 1222876..1224219(-) (vicK) [Streptococcus salivarius strain KSS5]
MTSIGLNITSFELALLFTLLFVAFYFIFLAYRDYRRVKNIRKLTKRVKSLMAGNYNEELRLKGDPELLELADSLNDLSDV
FRLTHENLAQEKNRLSSVLSYMSDGVIATNRRGQITMINSTAQRLLNLDYETATQMSILDLLDGENPYTYSELLSKTPEI
HLSRRDANDEFVTLRVNFALIRKESGFISGLVAVLHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALDE
EIAPNFIKVSLDETNRMMRMISDLLALSRIDNKSTQLDVEMTNFTAFMTYILNRFDQIKSQESNTGKTYEIIRDYPVNSI
WVEIDTDKMTQVVDNILNNAIKYSPDGGEITVSMKTTDSQLIVSISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGL
GLSIAKEIIKQHKGFIWAKSEYGKGSTFTIVLPYDKDAMMVDEWEME

Nucleotide


Download         Length: 1344 bp        

>NTDB_id=972967 AAAF57_RS05490 WP_410536163.1 1222876..1224219(-) (vicK) [Streptococcus salivarius strain KSS5]
ATGACTAGTATTGGCTTAAACATCACAAGCTTTGAACTAGCCTTACTCTTTACGCTCCTCTTTGTGGCTTTCTACTTTAT
TTTTCTTGCATATCGTGATTATCGACGAGTCAAAAATATTCGAAAGTTGACCAAGAGGGTCAAGTCCTTAATGGCAGGTA
ACTATAACGAGGAGTTACGCTTAAAGGGTGATCCAGAGCTTTTAGAGCTAGCTGACAGCTTGAATGATTTATCGGATGTC
TTTCGTTTGACGCATGAAAATCTAGCCCAGGAAAAAAACCGCTTATCATCAGTCCTCTCTTACATGAGTGATGGAGTTAT
TGCGACAAATCGCCGTGGTCAAATTACCATGATTAATAGCACAGCTCAGCGTTTGTTGAATCTAGATTATGAAACAGCGA
CACAGATGTCCATTTTAGATTTATTAGATGGCGAAAATCCCTATACTTATAGTGAATTGCTCTCTAAGACTCCTGAAATT
CATTTGTCACGTCGAGATGCCAACGATGAGTTTGTGACCTTACGTGTTAATTTTGCCCTTATTCGTAAAGAATCAGGTTT
TATCTCAGGTCTGGTTGCCGTTCTTCACGATGCCACTGAGCAAGAAAAAGAAGAGCGTGAACGTCGACTCTTCGTCTCAA
ACGTTAGTCATGAGTTGCGTACACCTTTGACTTCTGTAAAATCCTATCTGGAGGCACTTGATGATGGTGCTCTCGACGAA
GAGATTGCTCCTAACTTTATCAAAGTTTCTTTGGATGAGACCAATCGTATGATGCGAATGATTTCTGATCTCTTGGCACT
GTCACGTATTGACAATAAGAGTACCCAACTTGATGTTGAGATGACTAATTTCACAGCCTTCATGACCTATATCTTGAATC
GTTTTGACCAGATTAAAAGTCAAGAAAGCAATACTGGTAAGACGTACGAAATTATTCGAGATTACCCTGTAAATTCTATT
TGGGTGGAGATTGATACGGATAAGATGACTCAGGTCGTGGATAATATTCTTAACAATGCCATCAAGTATTCTCCTGATGG
TGGTGAGATTACAGTGTCCATGAAGACAACTGATTCACAGTTGATTGTTTCTATTTCTGACCAAGGTTTAGGTATCCCTA
AGAAAGATTTACCTTTGATTTTCGACCGTTTTTACCGTGTTGATAAGGCCAGAAGTCGTGCCCAGGGTGGAACGGGTCTA
GGCTTGTCCATTGCCAAAGAGATTATTAAACAACATAAGGGCTTCATTTGGGCTAAGAGTGAGTATGGTAAGGGTTCAAC
ATTTACAATTGTGCTTCCATATGACAAGGATGCCATGATGGTTGATGAATGGGAGATGGAGTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(325-435)

PAS fold (PAS)

(94-197)

His Kinase A (phospho-acceptor) domain (HisKA)

(208-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

73.671

92.617

0.682
  micB Streptococcus pneumoniae Cp1015

67.436

96.868

0.653

Multiple sequence alignment