Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AAAF57_RS05485 Genome accession   NZ_CP150847
Coordinates   1222061..1222870 (-) Length   269 a.a.
NCBI ID   WP_126405093.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217061..1227870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAAF57_RS05460 (AAAF57_05505) - 1218059..1218439 (-) 381 WP_410536161.1 DUF1934 domain-containing protein -
  AAAF57_RS05465 (AAAF57_05510) - 1218522..1219388 (-) 867 WP_288587243.1 GNAT family N-acetyltransferase -
  AAAF57_RS05470 (AAAF57_05515) yidA 1219566..1220375 (+) 810 WP_002890845.1 sugar-phosphatase -
  AAAF57_RS05475 (AAAF57_05520) - 1220377..1221591 (+) 1215 WP_073687783.1 aminoacyltransferase -
  AAAF57_RS05480 (AAAF57_05525) - 1221643..1222002 (-) 360 WP_037611660.1 YbaN family protein -
  AAAF57_RS05485 (AAAF57_05530) vicX 1222061..1222870 (-) 810 WP_126405093.1 MBL fold metallo-hydrolase Regulator
  AAAF57_RS05490 (AAAF57_05535) vicK 1222876..1224219 (-) 1344 WP_410536163.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AAAF57_RS05495 (AAAF57_05540) vicR 1224212..1224919 (-) 708 WP_002884978.1 response regulator YycF Regulator
  AAAF57_RS05500 (AAAF57_05545) - 1225204..1225971 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  AAAF57_RS05505 (AAAF57_05550) - 1226072..1226815 (+) 744 WP_410536165.1 transporter substrate-binding domain-containing protein -
  AAAF57_RS05510 (AAAF57_05555) - 1226833..1227531 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30007.86 Da        Isoelectric Point: 5.3499

>NTDB_id=972966 AAAF57_RS05485 WP_126405093.1 1222061..1222870(-) (vicX) [Streptococcus salivarius strain KSS5]
MSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGMD
IYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTMEN
QLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=972966 AAAF57_RS05485 WP_126405093.1 1222061..1222870(-) (vicX) [Streptococcus salivarius strain KSS5]
ATCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGAGAA
GAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGACCCGAGTGATT
TGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGCGTAGGCGTTTTAGCTCGTAAATATGGCATGGAT
ATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACATGT
TTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATCCAC
AGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTAACGGATACGGGTTATGTTTCTGATCGTATGGCAGGT
ATTATTGAGAATGCCGACGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTGGTC
AACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATCGGTA
ATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAAAAT
CAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACTGAC
AGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment