Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AABD45_RS08660 | Genome accession | NZ_CP150831 |
| Coordinates | 1873415..1873717 (-) | Length | 100 a.a. |
| NCBI ID | WP_045608499.1 | Uniprot ID | A0A4Q7I0S1 |
| Organism | Vibrio vulnificus strain Per1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1868415..1878717
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABD45_RS08635 (AABD45_09175) | - | 1868957..1870171 (+) | 1215 | WP_017420942.1 | pyridoxal phosphate-dependent aminotransferase | - |
| AABD45_RS08640 (AABD45_09180) | yfbR | 1870253..1870837 (+) | 585 | WP_017420943.1 | 5'-deoxynucleotidase | - |
| AABD45_RS08645 (AABD45_09185) | - | 1870843..1872174 (+) | 1332 | WP_406848914.1 | anti-phage deoxyguanosine triphosphatase | - |
| AABD45_RS08650 (AABD45_09190) | - | 1872196..1872804 (-) | 609 | WP_103196851.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AABD45_RS08655 (AABD45_09195) | rrtA | 1872808..1873368 (+) | 561 | WP_406848915.1 | rhombosortase | - |
| AABD45_RS08660 (AABD45_09200) | comEA | 1873415..1873717 (-) | 303 | WP_045608499.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| AABD45_RS08665 (AABD45_09205) | ppiD | 1873850..1875709 (-) | 1860 | WP_026130414.1 | peptidylprolyl isomerase | - |
| AABD45_RS08670 (AABD45_09210) | - | 1875886..1876158 (-) | 273 | WP_013572181.1 | HU family DNA-binding protein | - |
| AABD45_RS08675 (AABD45_09215) | lon | 1876352..1878703 (-) | 2352 | WP_017420949.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 10961.91 Da Isoelectric Point: 9.6577
>NTDB_id=972726 AABD45_RS08660 WP_045608499.1 1873415..1873717(-) (comEA) [Vibrio vulnificus strain Per1]
MKQVITLLAMLMAFSFPSVSFADSAMKAAEKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREAHGPFKTVDEL
VQVKGIGKSTIEKNQSRIKL
MKQVITLLAMLMAFSFPSVSFADSAMKAAEKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREAHGPFKTVDEL
VQVKGIGKSTIEKNQSRIKL
Nucleotide
Download Length: 303 bp
>NTDB_id=972726 AABD45_RS08660 WP_045608499.1 1873415..1873717(-) (comEA) [Vibrio vulnificus strain Per1]
ATGAAACAGGTAATTACTCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAATGAA
AGCAGCCGAGAAATATGAAGGCATTGAGATTTCCGTCAACATCAACACGGCAACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGACTTTAGAGAAGCTCATGGACCGTTTAAAACGGTTGATGAGTTA
GTTCAAGTGAAAGGTATCGGTAAGTCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
ATGAAACAGGTAATTACTCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAATGAA
AGCAGCCGAGAAATATGAAGGCATTGAGATTTCCGTCAACATCAACACGGCAACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGACTTTAGAGAAGCTCATGGACCGTTTAAAACGGTTGATGAGTTA
GTTCAAGTGAAAGGTATCGGTAAGTCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
59 |
100 |
0.59 |
| comEA | Vibrio campbellii strain DS40M4 |
53 |
100 |
0.53 |
| comEA | Vibrio cholerae C6706 |
51.02 |
98 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
51.02 |
98 |
0.5 |