Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | WOC70_RS11505 | Genome accession | NZ_CP150742 |
| Coordinates | 2312244..2312714 (+) | Length | 156 a.a. |
| NCBI ID | WP_125571269.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22707 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2307244..2317714
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC70_RS11470 (WOC70_11470) | - | 2307671..2307892 (+) | 222 | WP_000977381.1 | hypothetical protein | - |
| WOC70_RS11475 (WOC70_11475) | - | 2307885..2308046 (+) | 162 | WP_000048124.1 | DUF1270 family protein | - |
| WOC70_RS11480 (WOC70_11480) | - | 2308139..2308399 (+) | 261 | WP_176438283.1 | DUF1108 family protein | - |
| WOC70_RS11485 (WOC70_11485) | - | 2308408..2308671 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| WOC70_RS11490 (WOC70_11490) | - | 2308680..2310623 (+) | 1944 | WP_117231984.1 | AAA family ATPase | - |
| WOC70_RS11495 (WOC70_11495) | - | 2310625..2311545 (+) | 921 | WP_000138478.1 | recombinase RecT | - |
| WOC70_RS11500 (WOC70_11500) | - | 2311626..2312243 (+) | 618 | WP_115287106.1 | MBL fold metallo-hydrolase | - |
| WOC70_RS11505 (WOC70_11505) | ssbA | 2312244..2312714 (+) | 471 | WP_125571269.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC70_RS11510 (WOC70_11510) | - | 2312744..2313628 (+) | 885 | WP_031873996.1 | DnaD domain protein | - |
| WOC70_RS11515 (WOC70_11515) | - | 2313635..2313853 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| WOC70_RS11520 (WOC70_11520) | - | 2313862..2314266 (+) | 405 | WP_000401972.1 | RusA family crossover junction endodeoxyribonuclease | - |
| WOC70_RS11525 (WOC70_11525) | - | 2314279..2314647 (+) | 369 | WP_156979384.1 | SA1788 family PVL leukocidin-associated protein | - |
| WOC70_RS11530 (WOC70_11530) | - | 2314651..2314893 (+) | 243 | WP_029051973.1 | SAV1978 family virulence-associated passenger protein | - |
| WOC70_RS11535 (WOC70_11535) | - | 2314907..2315113 (+) | 207 | WP_000693989.1 | hypothetical protein | - |
| WOC70_RS11540 (WOC70_11540) | - | 2315116..2315517 (+) | 402 | WP_176438255.1 | hypothetical protein | - |
| WOC70_RS11545 (WOC70_11545) | - | 2315514..2315879 (+) | 366 | WP_176438264.1 | acetyltransferase | - |
| WOC70_RS11550 (WOC70_11550) | - | 2315872..2316126 (+) | 255 | WP_001065060.1 | DUF1024 family protein | - |
| WOC70_RS11555 (WOC70_11555) | - | 2316113..2316283 (+) | 171 | WP_000714412.1 | hypothetical protein | - |
| WOC70_RS11560 (WOC70_11560) | - | 2316276..2316806 (+) | 531 | WP_060474158.1 | dUTP pyrophosphatase | - |
| WOC70_RS11565 (WOC70_11565) | - | 2316843..2317049 (+) | 207 | WP_000195785.1 | DUF1381 domain-containing protein | - |
| WOC70_RS11570 (WOC70_11570) | - | 2317046..2317240 (+) | 195 | WP_000132920.1 | hypothetical protein | - |
| WOC70_RS11575 (WOC70_11575) | - | 2317237..2317440 (+) | 204 | WP_001072795.1 | hypothetical protein | - |
| WOC70_RS11580 (WOC70_11580) | - | 2317433..2317669 (+) | 237 | WP_000608273.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17595.36 Da Isoelectric Point: 4.9327
>NTDB_id=971574 WOC70_RS11505 WP_125571269.1 2312244..2312714(+) (ssbA) [Staphylococcus aureus strain TUM22707]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFVNCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNTNDSQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFVNCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNTNDSQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=971574 WOC70_RS11505 WP_125571269.1 2312244..2312714(+) (ssbA) [Staphylococcus aureus strain TUM22707]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCTTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTGTTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTTTTAGAACCAAAGAA
CACAAATGACTCTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCTTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTGTTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTTTTAGAACCAAAGAA
CACAAATGACTCTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
60.452 |
100 |
0.686 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.765 |
100 |
0.564 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |