Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WMR86_RS17595 | Genome accession | NZ_CP150645 |
| Coordinates | 3754065..3754592 (+) | Length | 175 a.a. |
| NCBI ID | WP_088494417.1 | Uniprot ID | - |
| Organism | Proteus vulgaris strain HJ90 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3749065..3759592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WMR86_RS17590 (WMR86_17590) | uvrA | 3750978..3753812 (-) | 2835 | WP_072070931.1 | excinuclease ABC subunit UvrA | - |
| WMR86_RS17595 (WMR86_17595) | ssb | 3754065..3754592 (+) | 528 | WP_088494417.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| WMR86_RS17600 (WMR86_17600) | zur | 3754806..3755336 (+) | 531 | WP_072070933.1 | zinc uptake transcriptional repressor Zur | - |
| WMR86_RS17605 (WMR86_17605) | - | 3755370..3755675 (-) | 306 | WP_196554567.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| WMR86_RS17610 (WMR86_17610) | - | 3755665..3755919 (-) | 255 | WP_196554568.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| WMR86_RS17615 (WMR86_17615) | lexA | 3756080..3756691 (-) | 612 | WP_072070935.1 | transcriptional repressor LexA | - |
| WMR86_RS17620 (WMR86_17620) | - | 3756819..3757190 (-) | 372 | WP_006536373.1 | diacylglycerol kinase | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18874.92 Da Isoelectric Point: 4.9468
>NTDB_id=970893 WMR86_RS17595 WP_088494417.1 3754065..3754592(+) (ssb) [Proteus vulgaris strain HJ90]
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGSMQMLGGRGGQDGAPSQGGQGGWGQPQQPQASQQFSGGAQSRPAQQPAAAPA
PNNEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGSMQMLGGRGGQDGAPSQGGQGGWGQPQQPQASQQFSGGAQSRPAQQPAAAPA
PNNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=970893 WMR86_RS17595 WP_088494417.1 3754065..3754592(+) (ssb) [Proteus vulgaris strain HJ90]
ATGGCGAGCAGAGGCGTAAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
CGGTGCAGTTGCCAACCTAACACTGGCAACATCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAAAAAACCG
AGTGGCACCGTGTGGTAATTTTCGGCAAATTAGCTGAAATTGCAGGCGAATATCTGCGTAAAGGTTCACAAGTGTATATC
GAAGGTCAATTACAAACACGTAAATGGCAAGACCAAAGTGGTCAAGACAGATATAGCACTGAAGTTGTCGTTAACATCGG
TGGCTCAATGCAGATGTTAGGTGGTCGTGGTGGACAAGATGGTGCGCCTTCACAAGGTGGTCAAGGCGGTTGGGGTCAAC
CACAACAGCCACAAGCATCACAACAATTCAGCGGTGGTGCGCAATCTCGCCCAGCACAACAACCCGCAGCAGCTCCAGCG
CCGAACAATGAACCACCAATGGATTTTGATGACGATATTCCGTTCTGA
ATGGCGAGCAGAGGCGTAAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
CGGTGCAGTTGCCAACCTAACACTGGCAACATCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAAAAAACCG
AGTGGCACCGTGTGGTAATTTTCGGCAAATTAGCTGAAATTGCAGGCGAATATCTGCGTAAAGGTTCACAAGTGTATATC
GAAGGTCAATTACAAACACGTAAATGGCAAGACCAAAGTGGTCAAGACAGATATAGCACTGAAGTTGTCGTTAACATCGG
TGGCTCAATGCAGATGTTAGGTGGTCGTGGTGGACAAGATGGTGCGCCTTCACAAGGTGGTCAAGGCGGTTGGGGTCAAC
CACAACAGCCACAAGCATCACAACAATTCAGCGGTGGTGCGCAATCTCGCCCAGCACAACAACCCGCAGCAGCTCCAGCG
CCGAACAATGAACCACCAATGGATTTTGATGACGATATTCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
73.514 |
100 |
0.777 |
| ssb | Glaesserella parasuis strain SC1401 |
56.757 |
100 |
0.6 |
| ssb | Neisseria meningitidis MC58 |
48.603 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.497 |