Detailed information NTG0970367

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACLFK2_RS07015
• Genome accession: NZ_CP177307
• Coordinates: 1506689..1507693 (+)
• Length: 334 a.a.
• NCBI ID: WP_003113871.1
• Uniprot ID: A0A0H2ZEU1
• Organism: Pseudomonas aeruginosa strain Pa021
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1501689..1512693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLFK2_RS06985 (ACLFK2_06985)	fghA	1501781..1502632 (+)	852	WP_003163269.1	S-formylglutathione hydrolase	-
ACLFK2_RS06990 (ACLFK2_06990)	ispF	1502703..1503176 (+)	474	WP_003092346.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACLFK2_RS06995 (ACLFK2_06995)	truD	1503173..1504240 (+)	1068	WP_003163270.1	tRNA pseudouridine(13) synthase TruD	-
ACLFK2_RS07000 (ACLFK2_07000)	surE	1504228..1504977 (+)	750	WP_003092341.1	5'/3'-nucleotidase SurE	-
ACLFK2_RS07005 (ACLFK2_07005)	-	1505010..1505645 (+)	636	WP_078451413.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	-
ACLFK2_RS07010 (ACLFK2_07010)	-	1505691..1506584 (+)	894	WP_031639387.1	peptidoglycan DD-metalloendopeptidase family protein	-
ACLFK2_RS07015 (ACLFK2_07015)	rpoS	1506689..1507693 (+)	1005	WP_003113871.1	RNA polymerase sigma factor RpoS	Regulator
ACLFK2_RS07020 (ACLFK2_07020)	fdxA	1508120..1508443 (-)	324	WP_003092272.1	ferredoxin FdxA	-
ACLFK2_RS07025 (ACLFK2_07025)	mutS	1508510..1511077 (-)	2568	WP_003113873.1	DNA mismatch repair protein MutS	-
ACLFK2_RS07030 (ACLFK2_07030)	-	1511203..1512210 (-)	1008	WP_003163274.1	TolB family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 38235.38 Da
• Isoelectric Point: 5.0478

>NTDB_id=970367 ACLFK2_RS07015 WP_003113871.1 1506689..1507693(+) (rpoS) [Pseudomonas aeruginosa strain Pa021]
MALKKEGPEFDHDDEVLLLEPGIMLDESSADEQPSPRATPKATTSFSSKQHKHIDYTRALDATQLYLNEIGFSPLLTPEE
EVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIE
RAIMNQTRTIRLPIHVVKELNVYLRAARELTHKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVTSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSESIDQWLTELTDKQREVVIRRFGLRGHESSTLEEVGQEIGLTRERVRQIQVEALKRLRE
ILEKNGLSSDALFQ

Nucleotide

• Length: 1005 bp

>NTDB_id=970367 ACLFK2_RS07015 WP_003113871.1 1506689..1507693(+) (rpoS) [Pseudomonas aeruginosa strain Pa021]
ATGGCACTCAAAAAAGAAGGGCCGGAGTTTGACCACGATGATGAAGTGCTCCTCCTGGAGCCCGGCATCATGCTGGACGA
GTCGTCTGCCGACGAGCAGCCTTCTCCCCGGGCAACTCCAAAAGCCACCACTTCCTTCTCTTCCAAACAACACAAGCACA
TCGACTACACGCGCGCGTTGGACGCAACGCAGCTGTATCTCAACGAAATCGGTTTCTCGCCCCTGTTGACGCCCGAAGAG
GAAGTCCACTTCGCTCGTCTGGCGCAGAAGGGCGATCCCGCTGGTCGGAAGCGGATGATCGAGAGCAACCTGCGGTTGGT
GGTGAAGATCGCCCGGCGCTATGTCAATCGCGGACTGTCCCTGCTCGACCTGATCGAGGAAGGCAACCTAGGCCTGATCC
GCGCCGTGGAGAAGTTCGATCCGGAGCGCGGATTCCGGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGACCATCGAG
CGGGCCATCATGAACCAGACCCGGACCATTCGCTTGCCGATCCATGTGGTCAAGGAGCTCAACGTCTACCTGCGTGCGGC
GCGGGAACTGACCCACAAGCTCGACCACGAACCTTCACCCGAAGAAATCGCCAACCTGCTGGAGAAGCCGGTCGCCGAGG
TCAAGCGCATGCTCGGCCTGAACGAACGGGTGACTTCGGTGGACGTCTCTCTTGGTCCGGACTCGGACAAGACCCTGCTG
GATACGCTCACCGACGATCGCCCCACCGACCCGTGCGAGCTGCTGCAGGATGACGATCTCAGCGAAAGCATCGACCAGTG
GCTGACGGAACTCACCGACAAGCAGCGTGAGGTGGTGATTCGCCGCTTCGGCTTGCGCGGGCACGAAAGCAGCACGCTGG
AAGAGGTCGGCCAGGAAATCGGCCTGACCCGCGAGCGGGTTCGTCAGATCCAGGTCGAGGCGCTGAAGCGCCTGCGGGAG
ATCCTGGAGAAGAACGGCCTGTCGAGTGACGCGCTGTTCCAGTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (179-253)

• Sigma-70 region 2 (Sigma70_r2) (99-168)

• Sigma-70, region 4 (Sigma70_r4) (267-320)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (61-94)

3D structure

• AlphaFold DB: A0A0H2ZEU1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	66.463	98.204	0.653