Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH77_RS11185 | Genome accession | NZ_CP150435 |
| Coordinates | 2221155..2221490 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-2837 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2216155..2226490
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH77_RS11165 (MHH77_11165) | gcvT | 2216633..2217730 (-) | 1098 | WP_144462734.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH77_RS11170 (MHH77_11170) | - | 2218292..2219962 (+) | 1671 | WP_339163088.1 | SNF2-related protein | - |
| MHH77_RS11175 (MHH77_11175) | - | 2219977..2220774 (+) | 798 | WP_058014689.1 | YqhG family protein | - |
| MHH77_RS11180 (MHH77_11180) | - | 2220957..2221121 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MHH77_RS11185 (MHH77_11185) | sinR | 2221155..2221490 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MHH77_RS11190 (MHH77_11190) | - | 2221558..2222358 (-) | 801 | WP_058014688.1 | TasA family protein | - |
| MHH77_RS11195 (MHH77_11195) | - | 2222416..2222988 (-) | 573 | WP_058014687.1 | signal peptidase I | - |
| MHH77_RS11200 (MHH77_11200) | tapA | 2223033..2223560 (-) | 528 | WP_058014686.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH77_RS11205 (MHH77_11205) | - | 2223827..2224138 (+) | 312 | WP_061410249.1 | YqzG/YhdC family protein | - |
| MHH77_RS11210 (MHH77_11210) | - | 2224172..2224366 (-) | 195 | WP_044140973.1 | YqzE family protein | - |
| MHH77_RS11215 (MHH77_11215) | comGG | 2224426..2224809 (-) | 384 | WP_058014684.1 | competence type IV pilus minor pilin ComGG | - |
| MHH77_RS11220 (MHH77_11220) | comGF | 2224806..2225336 (-) | 531 | WP_280150117.1 | competence type IV pilus minor pilin ComGF | - |
| MHH77_RS11225 (MHH77_11225) | comGE | 2225245..2225562 (-) | 318 | WP_339163096.1 | competence type IV pilus minor pilin ComGE | - |
| MHH77_RS11230 (MHH77_11230) | comGD | 2225546..2225992 (-) | 447 | WP_339163098.1 | competence type IV pilus minor pilin ComGD | - |
| MHH77_RS11235 (MHH77_11235) | comGC | 2225985..2226278 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=970299 MHH77_RS11185 WP_012010555.1 2221155..2221490(+) (sinR) [Bacillus sp. FSL K6-2837]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=970299 MHH77_RS11185 WP_012010555.1 2221155..2221490(+) (sinR) [Bacillus sp. FSL K6-2837]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |